RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 FMO5P49326 533 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 PTPROQ16827 1216 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 USP41Q3LFD5 358 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 LUZP1Q86V48 1076 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 DEFB123Q8N688 67 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 ANKRD20A12PQ8NF67 263 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 SUSD3Q96L08 255 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 B3GALT6Q96L58 329 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 TUBGCP2Q9BSJ2 902 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 HERC2P3Q9BVR0 1158 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 LMAN2LQ9H0V9 348 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 ENTPD7Q9NQZ7 604 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 TLR9Q9NR96 1032 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 ERVFC1P60507 584 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 TPM4P67936 248 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 MYL7Q01449 175 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 MAN2A1Q16706 1144 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 SGSM1Q2NKQ1 1148 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 CBWD6Q4V339 395 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 CBWD3Q5JTY5 395 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 CBWD5Q5RIA9 395 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 CCDC150Q8NCX0 1101 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 FAM200AQ8TCP9 573 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 TAS1R2Q8TE23 839 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 SENP8Q96LD8 212 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 TCF25Q9BQ70 676 aa23.79■■□□□ 1.4
CHMP2A-204ENST00000597848 GOLGA6L19H0YKK7 550 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 PES1O00541 588 aaKnown RBP23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 C2CD2LO14523 706 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 CYB561D2O14569 222 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 LPXNO60711 386 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 CXCL14O95715 111 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 EFEMP2O95967 443 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 URODP06132 367 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 TPM2P07951 284 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 ATICP31939 592 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 GLUD2P49448 558 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 AARSP49588 968 aaKnown RBP eCLIP23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 CETN1Q12798 172 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 ZNF699Q32M78 642 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 RNF168Q8IYW5 571 aaPredicted RBP23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 FBXL13Q8NEE6 735 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 TTPALQ9BTX7 342 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 IMPG2Q9BZV3 1241 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 ZBP1Q9H171 429 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 TAB2Q9NYJ8 693 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 PCDHB8Q9UN66 801 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 SNX9Q9Y5X1 595 aa23.78■■□□□ 1.4
CHMP2A-204ENST00000597848 CTSAP10619 480 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 ODC1P11926 461 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 FGFR3P22607 806 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 IGFBP4P22692 258 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 TKTP29401 623 aaKnown RBP23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 CAMK1Q14012 370 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 WDR72Q3MJ13 1102 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 VWA3BQ502W6 1294 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 PLPP4Q5VZY2 271 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 APPL2Q8NEU8 664 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 AUTS2Q8WXX7 1259 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 RIN2Q8WYP3 895 aaPredicted RBP23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 GAS2L1Q99501 681 aaPredicted RBP23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 ANP32EQ9BTT0 268 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 PI4K2AQ9BTU6 479 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 HSD3B7Q9H2F3 369 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 NGRNQ9NPE2 291 aaKnown RBP23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 MRPL17Q9NRX2 175 aaKnown RBP23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 RAB20Q9NX57 234 aa23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 NXF1Q9UBU9 619 aaKnown RBP23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 TIMM13Q9Y5L4 95 aaPredicted RBP23.77■■□□□ 1.4
CHMP2A-204ENST00000597848 ARHGEF37A1IGU5 675 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 M0QZQ0 153 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 SYN3O14994 580 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 HUS1O60921 280 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 ZNF18P17022 549 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 IRS1P35568 1242 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 TNNC1P63316 161 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 SMC1AQ14683 1233 aaKnown RBP23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 KRT31Q15323 416 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 ZNF667Q5HYK9 610 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 WDR44Q5JSH3 913 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 RTP2Q5QGT7 225 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 PDE12Q6L8Q7 609 aaKnown RBP23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 TAF4BQ92750 862 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 SEMA4DQ92854 862 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 ELMO3Q96BJ8 720 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 MRPL38Q96DV4 380 aaKnown RBP23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 MMS19Q96T76 1030 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 XYLT2Q9H1B5 865 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 CHST7Q9NS84 486 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 SSX2IPQ9Y2D8 614 aa23.76■■□□□ 1.39
CHMP2A-204ENST00000597848 LAMA2P24043 3122 aaKnown RBP23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 P4HA2O15460 535 aa23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 DSG1Q02413 1049 aa23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 METTL23Q86XA0 190 aa23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 CDX2Q99626 313 aaPredicted RBP23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 VPS16Q9H269 839 aa23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 NDST4Q9H3R1 872 aa23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 GDAP2Q9NXN4 497 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms