RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 EEF1DP3Q658K8 133 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 MAEAQ7L5Y9 396 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 FBXL16Q8N461 479 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 FBXL5Q9UKA1 691 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 CCDC163A0A0D9SF12 145 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 TRAPPC3O43617 180 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 USO1O60763 962 aaKnown RBP17.02■□□□□ 0.32
LIG1-214ENST00000597146 AKAP3O75969 853 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 CAVIN2O95810 425 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 CDCA2Q69YH5 1023 aaPredicted RBP17.02■□□□□ 0.32
LIG1-214ENST00000597146 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 SYNPOQ8N3V7 929 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 DAGLBQ8NCG7 672 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 E2F7Q96AV8 911 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 ZNF274Q96GC6 653 aaPredicted RBP17.02■□□□□ 0.32
LIG1-214ENST00000597146 AIFM3Q96NN9 605 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 HHIPQ96QV1 700 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 FZD8Q9H461 694 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 KLK13Q9UKR3 277 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 SLC8A2Q9UPR5 921 aa17.02■□□□□ 0.32
LIG1-214ENST00000597146 A0A087WWV3 80 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 SLITRK3O94933 977 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 CEACAM1P13688 526 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 LIG1P18858 919 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 RARRES1P49788 294 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
LIG1-214ENST00000597146 SOWAHCQ53LP3 525 aaPredicted RBP17.01■□□□□ 0.31
LIG1-214ENST00000597146 ARID3BQ8IVW6 561 aaPredicted RBP17.01■□□□□ 0.31
LIG1-214ENST00000597146 LEMD2Q8NC56 503 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 DEFB124Q8NES8 71 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 CCDC43Q96MW1 224 aaKnown RBP17.01■□□□□ 0.31
LIG1-214ENST00000597146 UROC1Q96N76 676 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
LIG1-214ENST00000597146 MAST4O15021 2626 aa17■□□□□ 0.31
LIG1-214ENST00000597146 BPTFQ12830 3046 aa17■□□□□ 0.31
LIG1-214ENST00000597146 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
LIG1-214ENST00000597146 CSRP1P21291 193 aaKnown RBP17■□□□□ 0.31
LIG1-214ENST00000597146 ANKRD1Q15327 319 aa17■□□□□ 0.31
LIG1-214ENST00000597146 FAM187BQ17R55 369 aa17■□□□□ 0.31
LIG1-214ENST00000597146 CTXN3Q4LDR2 81 aa17■□□□□ 0.31
LIG1-214ENST00000597146 TPGS2Q68CL5 300 aa17■□□□□ 0.31
LIG1-214ENST00000597146 TMC8Q8IU68 726 aa17■□□□□ 0.31
LIG1-214ENST00000597146 ZBTB8OSQ8IWT0 167 aa17■□□□□ 0.31
LIG1-214ENST00000597146 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
LIG1-214ENST00000597146 MKNK1Q9BUB5 465 aa17■□□□□ 0.31
LIG1-214ENST00000597146 LRRC3Q9BY71 257 aa17■□□□□ 0.31
LIG1-214ENST00000597146 TMEM9BQ9NQ34 198 aa17■□□□□ 0.31
LIG1-214ENST00000597146 NEUROG3Q9Y4Z2 214 aa17■□□□□ 0.31
LIG1-214ENST00000597146 YIPF1Q9Y548 306 aa17■□□□□ 0.31
LIG1-214ENST00000597146 CELSR3Q9NYQ7 3312 aa17■□□□□ 0.31
LIG1-214ENST00000597146 PCNX2A6NKB5 2137 aa17■□□□□ 0.31
LIG1-214ENST00000597146 ZNF638Q14966 1978 aaKnown RBP17■□□□□ 0.31
LIG1-214ENST00000597146 TNRC6BQ9UPQ9 1833 aaKnown RBP17■□□□□ 0.31
LIG1-214ENST00000597146 PATE3B3GLJ2 98 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 PODXLO00592 558 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 CDX4O14627 284 aaPredicted RBP16.99■□□□□ 0.31
LIG1-214ENST00000597146 MARCH6O60337 910 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
LIG1-214ENST00000597146 ANAPC15P60006 121 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
LIG1-214ENST00000597146 TOB2Q14106 344 aaPredicted RBP16.99■□□□□ 0.31
LIG1-214ENST00000597146 MRPL58Q14197 206 aaKnown RBP16.99■□□□□ 0.31
LIG1-214ENST00000597146 ELF2Q15723 593 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 UAP1L1Q3KQV9 507 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 FSTL4Q6MZW2 842 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 C19orf48Q6RUI8 117 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 RNF19BQ6ZMZ0 732 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 PIGOQ8TEQ8 1089 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 BSNDQ8WZ55 320 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
LIG1-214ENST00000597146 GPR88Q9GZN0 384 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 ANKEF1Q9NU02 776 aa16.99■□□□□ 0.31
LIG1-214ENST00000597146 AFF4Q9UHB7 1163 aaKnown RBP16.99■□□□□ 0.31
LIG1-214ENST00000597146 DENND4CQ5VZ89 1909 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 H7C4K7 107 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 SYN3O14994 580 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 CDKL5O76039 1030 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 LYPLA2O95372 231 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 PRAMEF12O95522 483 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 CPB1P15086 417 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 EVCP57679 992 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 PPP4R3AQ6IN85 833 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 HAUS6Q7Z4H7 955 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 CHFRQ96EP1 664 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 KIF12Q96FN5 646 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 TMEM209Q96SK2 561 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 CCDC113Q9H0I3 377 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 DNAJC25Q9H1X3 360 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 KCNJ14Q9UNX9 436 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 ADAMTS9Q9P2N4 1935 aa16.98■□□□□ 0.31
LIG1-214ENST00000597146 SMIM28A0A1B0GU29 152 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 DPYSL4O14531 572 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 RNF40O75150 1001 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 RHOBTB1O94844 696 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 VNN2O95498 520 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 GCFC2P16383 781 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms