RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 CYP1B1Q16678 543 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 MFSD5Q6N075 450 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 USP37Q86T82 979 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 MORC4Q8TE76 937 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 LRRC37BQ96QE4 947 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 IWS1Q96ST2 819 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 NPHS2Q9NP85 383 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 PHTF1Q9UMS5 762 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 HLA-DRAP01903 254 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 DSG3P32926 999 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 HADHBP55084 474 aaKnown RBP16.16■□□□□ 0.18
UPF1-204ENST00000596842 PSMC5P62195 406 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 ZWILCHQ9H900 591 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 AGTPBP1Q9UPW5 1226 aa16.16■□□□□ 0.18
UPF1-204ENST00000596842 CCNE2O96020 404 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 USP4Q13107 963 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 RHOT1Q8IXI2 618 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 RXFP1Q9HBX9 757 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 A0A1W2PPM1 405 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 DHX15O43143 795 aaKnown RBP16.15■□□□□ 0.18
UPF1-204ENST00000596842 PECAM1P16284 738 aaPredicted RBP16.15■□□□□ 0.18
UPF1-204ENST00000596842 TAC1P20366 129 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 RPA3P35244 121 aaPredicted RBP16.15■□□□□ 0.18
UPF1-204ENST00000596842 WDR4P57081 412 aaKnown RBP16.15■□□□□ 0.18
UPF1-204ENST00000596842 CYP24A1Q07973 514 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 KCNT1Q5JUK3 1230 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 ANO5Q75V66 913 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 USH1CQ9Y6N9 552 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 A0A0G2JND7 137 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 ENTPD3O75355 529 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 IVDP26440 423 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 BNIP1Q12981 228 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 NBPF20Q3BBV1 942 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 PPP1R21Q6ZMI0 780 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 GPD1LQ8N335 351 aa16.15■□□□□ 0.18
UPF1-204ENST00000596842 ZNF70Q9UC06 446 aaPredicted RBP16.15■□□□□ 0.18
UPF1-204ENST00000596842 ATP2A2P16615 1042 aaKnown RBP16.14■□□□□ 0.17
UPF1-204ENST00000596842 ALCAMQ13740 583 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 PTK6Q13882 451 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 LARGE2Q8N3Y3 721 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.17
UPF1-204ENST00000596842 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
UPF1-204ENST00000596842 MCEEQ96PE7 176 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 STRA6Q9BX79 667 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 UMODL1Q5DID0 1318 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 ADGRA3Q8IWK6 1321 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 WDR64B1ANS9 1081 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 CAP2P40123 477 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 NLRP11P59045 1033 aaKnown RBP16.14■□□□□ 0.17
UPF1-204ENST00000596842 ZBTB16Q05516 673 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 CRYMQ14894 314 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 CGB2Q6NT52 195 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 MFSD7Q6UXD7 560 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 GBP7Q8N8V2 638 aaPredicted RBP16.14■□□□□ 0.17
UPF1-204ENST00000596842 SYTL5Q8TDW5 730 aaPredicted RBP16.14■□□□□ 0.17
UPF1-204ENST00000596842 MAIP1Q8WWC4 291 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 TSC22D3Q99576 134 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 UBN1Q9NPG3 1134 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 ETAA1Q9NY74 926 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 HERC5Q9UII4 1024 aaKnown RBP16.14■□□□□ 0.17
UPF1-204ENST00000596842 WNT7BP56706 349 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 GAD2Q05329 585 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 EFTUD2Q15029 972 aaKnown RBP eCLIP16.14■□□□□ 0.176e-6■■□□□ 12.5
UPF1-204ENST00000596842 ZBTB41Q5SVQ8 909 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 CYP4A22Q5TCH4 519 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 SCARA3Q6AZY7 606 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 ZBTB33Q86T24 672 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 VTI1AQ96AJ9 217 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 MAGEB18Q96M61 343 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 PCDHB2Q9Y5E7 798 aa16.14■□□□□ 0.17
UPF1-204ENST00000596842 YDJCA8MPS7 323 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 F8VP50 259 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 YY1P25490 414 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 EPHB2P29323 1055 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 SSTR1P30872 391 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 OSTNP61366 133 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 CFAP57Q96MR6 1250 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 TMEM109Q9BVC6 243 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 ZNF277Q9NRM2 450 aaPredicted RBP16.13■□□□□ 0.17
UPF1-204ENST00000596842 FEM1BQ9UK73 627 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 FZD1Q9UP38 647 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 ATP8B3O60423 1300 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 GRIN3BO60391 1043 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 FDX1P10109 184 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 KRT4P19013 534 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 GPC3P51654 580 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 RAD23BP54727 409 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
UPF1-204ENST00000596842 TMEM132AQ24JP5 1023 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 BBS9Q3SYG4 887 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 TXNRD3NBQ6F5E7 133 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 FAM160B2Q86V87 743 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 ZNF516Q92618 1163 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 KIF3CO14782 793 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 PROSCO94903 275 aa16.13■□□□□ 0.17
UPF1-204ENST00000596842 ALDH3A1P30838 453 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms