RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SLFN12LQ6IEE8 588 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 RNF19BQ6ZMZ0 732 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 RTL10Q7L3V2 364 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 CD302Q8IX05 232 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 SLC44A3Q8N4M1 653 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 APPL2Q8NEU8 664 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 BEST2Q8NFU1 509 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 ING5Q8WYH8 240 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 POMGNT1Q8WZA1 660 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 FGF13Q92913 245 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 HPS3Q969F9 1004 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 DHX58Q96C10 678 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 TSPAN18Q96SJ8 248 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 TRIM9Q9C026 710 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 CRISPLD1Q9H336 500 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 ASB7Q9H672 318 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 PANK4Q9NVE7 773 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 KBTBD4Q9NVX7 518 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 DERAQ9Y315 318 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 C2CD2Q9Y426 696 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.16□□□□□ -0.14
LIG1-212ENST00000596549 KRBA1A5PL33 1030 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 PIRO00625 290 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 CUTAO60888 179 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 OAZ2O95190 189 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 LRG1P02750 347 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 RHOP08100 348 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 CPB1P15086 417 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 NPR3P17342 541 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 ADCY1Q08828 1119 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 PRSS36Q5K4E3 855 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 TPGS2Q68CL5 300 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 PARM1Q6UWI2 310 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 BRSK2Q8IWQ3 736 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 TCEAL8Q8IYN2 117 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 SAAL1Q96ER3 474 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 FAM84AQ96KN4 292 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 ACCSQ96QU6 501 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 TMEM209Q96SK2 561 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 PHOX2BQ99453 314 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 CBWD1Q9BRT8 395 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 RPP25Q9BUL9 199 aaKnown RBP14.15□□□□□ -0.14
LIG1-212ENST00000596549 CYP4F11Q9HBI6 524 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 AFF4Q9UHB7 1163 aaKnown RBP14.15□□□□□ -0.14
LIG1-212ENST00000596549 PTPRDP23468 1912 aa14.15□□□□□ -0.14
LIG1-212ENST00000596549 PRRG1O14668 218 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 PRPF6O94906 941 aaKnown RBP14.14□□□□□ -0.15
LIG1-212ENST00000596549 HSP90AA1P07900 732 aaKnown RBP14.14□□□□□ -0.15
LIG1-212ENST00000596549 SRFP11831 508 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 CEBPBP17676 345 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 CCR2P41597 374 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 LILRA4P59901 499 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 ALCAMQ13740 583 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 SCARA3Q6AZY7 606 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 DSTYKQ6XUX3 929 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 SIX5Q8N196 739 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 OR10T2Q8NGX3 314 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 GPR152Q8TDT2 470 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 NXPE3Q969Y0 559 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 CHAMP1Q96JM3 812 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 PGLYRP2Q96PD5 576 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 AVENQ9NQS1 362 aaPredicted RBP14.14□□□□□ -0.15
LIG1-212ENST00000596549 EXOC7Q9UPT5 735 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 YIPF1Q9Y548 306 aa14.14□□□□□ -0.15
LIG1-212ENST00000596549 ZFP37Q9Y6Q3 630 aaPredicted RBP14.14□□□□□ -0.15
LIG1-212ENST00000596549 ODC1P11926 461 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 TYMPP19971 482 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 GARTP22102 1010 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 CASP1P29466 404 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 ELF1P32519 619 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 HOXD13P35453 343 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 POU5F1Q01860 360 aaKnown RBP14.13□□□□□ -0.15
LIG1-212ENST00000596549 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
LIG1-212ENST00000596549 EHHADHQ08426 723 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 TWF1Q12792 350 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 CCDC65Q8IXS2 484 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 TTC9BQ8N6N2 239 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 FLCNQ8NFG4 579 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 TCEAL4Q96EI5 215 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 SENP8Q96LD8 212 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 RTP3Q9BQQ7 232 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 FAM213AQ9BRX8 229 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 CEP72Q9P209 647 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 KCNH3Q9ULD8 1083 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 CA14Q9ULX7 337 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 PCDHA7Q9UN72 937 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 GREB1Q4ZG55 1949 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 PTPRJQ12913 1337 aa14.13□□□□□ -0.15
LIG1-212ENST00000596549 MTMR11A4FU01 709 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 GOLGA8IPA6NC78 632 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 GOLGA8JA6NMD2 632 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 PI15O43692 258 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 MOSPD3O75425 235 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 IL18RAPO95256 599 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 CYP11A1P05108 521 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 AOC1P19801 751 aa14.12□□□□□ -0.15
LIG1-212ENST00000596549 FCARP24071 287 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms