RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 WDR44Q5JSH3 913 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 RINT1Q6NUQ1 792 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 C1orf186Q6ZWK4 172 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 TMC8Q8IU68 726 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 ELMOD1Q8N336 334 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 APPL2Q8NEU8 664 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 FBXO18Q8NFZ0 1043 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 DRC1Q96MC2 740 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 DNAJC25Q9H1X3 360 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 CRISPLD1Q9H336 500 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 C17orf75Q9HAS0 396 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 ASAH2Q9NR71 780 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 RAB23Q9ULC3 237 aa10.89□□□□□ -0.67
LIG1-209ENST00000596104 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.89□□□□□ -0.67
LIG1-209ENST00000596104 K7ESF4 209 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 M0QZQ0 153 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 SLC30A4O14863 429 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 CHADO15335 359 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 SLC16A4O15374 487 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 HRO43593 1189 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 LRP3O75074 770 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 TOM1L1O75674 476 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 OAZ2O95190 189 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 PAPSS2O95340 614 aaPredicted RBP10.88□□□□□ -0.67
LIG1-209ENST00000596104 ADRB1P08588 477 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 CPB1P15086 417 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 LRPAP1P30533 357 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 TOB1P50616 345 aaPredicted RBP10.88□□□□□ -0.67
LIG1-209ENST00000596104 MCL1Q07820 350 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 FCHO2Q0JRZ9 810 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 NOLC1Q14978 699 aaKnown RBP eCLIP10.88□□□□□ -0.67
LIG1-209ENST00000596104 ZBTB6Q15916 424 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 IL17AQ16552 155 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 CCDC83Q8IWF9 413 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 SPEM1Q8N4L4 309 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 TMEM161BQ8NDZ6 487 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 NETO1Q8TDF5 533 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 E2F7Q96AV8 911 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 MSANTD3Q96H12 275 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 LRRC3BQ96PB8 259 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 LLPHQ9BRT6 129 aaKnown RBP10.88□□□□□ -0.67
LIG1-209ENST00000596104 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
LIG1-209ENST00000596104 MKNK1Q9BUB5 465 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 GPR88Q9GZN0 384 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 RBM12Q9NTZ6 932 aaKnown RBP10.88□□□□□ -0.67
LIG1-209ENST00000596104 DNM3Q9UQ16 869 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
LIG1-209ENST00000596104 KMT2BQ9UMN6 2715 aaPredicted RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 A0A1W2PRU2 124 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 TTC26A0AVF1 554 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 CHURC1-FNTBB4DL54 471 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 OR4Q2P0C623 313 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 CXCL8P10145 99 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 GUCY2CP25092 1073 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 MARCKSP29966 332 aaPredicted RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 CDC25AP30304 524 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 SOX9P48436 509 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 FNTBP49356 437 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 YWHAHQ04917 246 aaPredicted RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 DUSP4Q13115 394 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 SRSF5Q13243 272 aaKnown RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 SIM2Q14190 667 aaPredicted RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 STXBP5Q5T5C0 1151 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 C1orf228Q6PIY5 440 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 TXNDC11Q6PKC3 985 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 ZPBP2Q6X784 338 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 PRR23BQ6ZRT6 265 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 Q6ZS52 159 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 TIPINQ9BVW5 301 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 OXCT2Q9BYC2 517 aaPredicted RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 RAB34Q9BZG1 259 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 HAPLN2Q9GZV7 340 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 SLITRK6Q9H5Y7 841 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 C8orf33Q9H7E9 229 aaPredicted RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 PLEKHA5Q9HAU0 1116 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 SEMA4GQ9NTN9 838 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 C2orf42Q9NWW7 574 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 ANKFY1Q9P2R3 1169 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 NOL7Q9UMY1 257 aaKnown RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 LIMCH1Q9UPQ0 1083 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 PCDHB6Q9Y5E3 794 aa10.87□□□□□ -0.67
LIG1-209ENST00000596104 TIMM13Q9Y5L4 95 aaPredicted RBP10.87□□□□□ -0.67
LIG1-209ENST00000596104 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.86□□□□□ -0.67
LIG1-209ENST00000596104 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 OR6C75A6NL08 312 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 CLTAP09496 248 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 MAPTP10636 758 aaKnown RBP10.86□□□□□ -0.67
LIG1-209ENST00000596104 PLS3P13797 630 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 U2AF2P26368 475 aaKnown RBP eCLIP10.86□□□□□ -0.67
LIG1-209ENST00000596104 HOXA6P31267 233 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 HOXC13P31276 330 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 CTHP32929 405 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 CNR2P34972 360 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 SPAG1Q07617 926 aa10.86□□□□□ -0.67
LIG1-209ENST00000596104 GPR17Q13304 367 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms