RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 RNF169Q8NCN4 708 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 NHEJ1Q9H9Q4 299 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 CYP3A43Q9HB55 503 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 GOLGA2P5Q9HBQ8 144 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 KCND1Q9NSA2 647 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 POLIQ9UNA4 740 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 BZW2Q9Y6E2 419 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 CEP290O15078 2479 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 CCDC172P0C7W6 258 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 RAG1P15918 1043 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 ANXA13P27216 316 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 PNPLA4P41247 253 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 ZNF132P52740 706 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 MYO1EQ12965 1108 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 WDR72Q3MJ13 1102 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 ZNF571Q7Z3V5 609 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 LIMS2Q7Z4I7 341 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 SDCBP2Q9H190 292 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 FAM124BQ9H5Z6 455 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 HAUS4Q9H6D7 363 aa15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 PRDM5Q9NQX1 630 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-211ENST00000595945 EIF3CLB5ME19 914 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 LCA5LO95447 670 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 RPL9P32969 192 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 ARID5AQ03989 594 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 PTK2Q05397 1052 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 TUSC3Q13454 348 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 NOMO2Q5JPE7 1267 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 GLB1LQ6UWU2 654 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 TOGARAM2Q6ZUX3 1019 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 NPAS4Q8IUM7 802 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 ZNF560Q96MR9 790 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 EIF3CQ99613 913 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 GDAP2Q9NXN4 497 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 NOCTQ9UK39 431 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 NENFQ9UMX5 172 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 R3HCC1Q9Y3T6 440 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 ADGRG1Q9Y653 693 aa15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 EPN1Q9Y6I3 576 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-211ENST00000595945 SPTLC1O15269 473 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 CYP26A1O43174 497 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 NDUFA10O95299 355 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 POMCP01189 267 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 PFKMP08237 780 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 FGFR1P11362 822 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 P4HA1P13674 534 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 CSF2RAP15509 400 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 CYLC1P35663 651 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 TAF6P49848 677 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 KIF11P52732 1056 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 YWHAEP62258 255 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 DSC1Q08554 894 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 INCA1Q0VD86 236 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 IKBKEQ14164 716 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 TDRD12Q587J7 1177 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 CD300LGQ6UXG3 332 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 SCARA5Q6ZMJ2 495 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 TMEM199Q8N511 208 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 RSPH1Q8WYR4 309 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 CCDC42Q96M95 316 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 UROC1Q96N76 676 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 CASD1Q96PB1 797 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 SMYD3Q9H7B4 428 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 CISHQ9NSE2 258 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 KANSL3Q9P2N6 904 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 NXF1Q9UBU9 619 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 INPP5FQ9Y2H2 1132 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 PCDHB7Q9Y5E2 793 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 PCDHB4Q9Y5E5 795 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 MYH10P35580 1976 aa15.78■□□□□ 0.12
SHKBP1-211ENST00000595945 ABHD14A-ACY1A0A1B0GW23 586 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 ESPNB1AK53 854 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 PODXLO00592 558 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 ZNF263O14978 683 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 HOXA2O43364 376 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 B4GALT3O60512 393 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 WEE2P0C1S8 567 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 IBSPP21815 317 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 RAP1GAPP47736 663 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 AARSP49588 968 aaKnown RBP eCLIP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 BPIFB4P59827 614 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 LILRA4P59901 499 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 UPP1Q16831 310 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 SV2CQ496J9 727 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 NOP9Q86U38 636 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 RPUSD2Q8IZ73 545 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 TTC39CQ8N584 583 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 RBBP8NLQ8NC74 664 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 SLC30A5Q8TAD4 765 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 URGCPQ8TCY9 931 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 EPS8L1Q8TE68 723 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 SLC20A1Q8WUM9 679 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 DDX1Q92499 740 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 DDX27Q96GQ7 796 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 IL23AQ9NPF7 189 aa15.77■□□□□ 0.12
SHKBP1-211ENST00000595945 VWA8A3KMH1 1905 aa15.76■□□□□ 0.11
SHKBP1-211ENST00000595945 KPNA7A9QM74 516 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms