RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PRPF4BQ13523 1007 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 C8orf34Q49A92 452 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 C1orf228Q6PIY5 440 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 ARID3BQ8IVW6 561 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 TRIM22Q8IYM9 498 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 HSD17B14Q9BPX1 270 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 ASAH2Q9NR71 780 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 ANKEF1Q9NU02 776 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 TPCN1Q9ULQ1 816 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 CELSR3Q9NYQ7 3312 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 PDCD11Q14690 1871 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 TAF4O00268 1085 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 CAVIN2O95810 425 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 SSRP1Q08945 709 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 MRPL58Q14197 206 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 FAM187BQ17R55 369 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 CTXN3Q4LDR2 81 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 CPLX2Q6PUV4 134 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 RNF19BQ6ZMZ0 732 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 KRT25Q7Z3Z0 450 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 NEK8Q86SG6 692 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 DAGLBQ8NCG7 672 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 BSNDQ8WZ55 320 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 LRRC3Q9BY71 257 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 SLC8A2Q9UPR5 921 aa15.1■□□□□ 0.01
SHKBP1-208ENST00000595726 HELZ2Q9BYK8 2649 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 CCDC163A0A0D9SF12 145 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 SMIM28A0A1B0GU29 152 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 LNP1A1A4G5 178 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 HYAL3O43820 417 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 PFKFB2O60825 505 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 DTNBO60941 627 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 DEXIO95424 95 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 ANKRD1Q15327 319 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 DAB2IPQ5VWQ8 1189 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 TPGS2Q68CL5 300 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 CDCA2Q69YH5 1023 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 ZBTB8OSQ8IWT0 167 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 SYNPOQ8N3V7 929 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 E2F7Q96AV8 911 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 CCDC43Q96MW1 224 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 UROC1Q96N76 676 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 ADPGKQ9BRR6 497 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 GPR88Q9GZN0 384 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 INVSQ9Y283 1065 aa15.09■□□□□ 0.01
SHKBP1-208ENST00000595726 CCDC194A0A1B0GVG4 234 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 BCLAF3A2AJT9 711 aaKnown RBP15.08■□□□□ 0
SHKBP1-208ENST00000595726 H7C4K7 107 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 PODXLO00592 558 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 CDX4O14627 284 aaPredicted RBP15.08■□□□□ 0
SHKBP1-208ENST00000595726 LYPLA2O95372 231 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 CEACAM1P13688 526 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
SHKBP1-208ENST00000595726 EARS2Q5JPH6 523 aaKnown RBP15.08■□□□□ 0
SHKBP1-208ENST00000595726 FSTL4Q6MZW2 842 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 TMC8Q8IU68 726 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 CEP120Q8N960 986 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 DEFB124Q8NES8 71 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 OXER1Q8TDS5 423 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 HHIPQ96QV1 700 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 TMEM209Q96SK2 561 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 MKNK1Q9BUB5 465 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 CRISPLD1Q9H336 500 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 POLD4Q9HCU8 107 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 AFF4Q9UHB7 1163 aaKnown RBP15.08■□□□□ 0
SHKBP1-208ENST00000595726 ATG2BQ96BY7 2078 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 STK36Q9NRP7 1315 aa15.08■□□□□ 0
SHKBP1-208ENST00000595726 FAM205CA6NFA0 338 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 PATE3B3GLJ2 98 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 ACKR2O00590 384 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 DPYSL4O14531 572 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 AKAP3O75969 853 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 CDKL5O76039 1030 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 LARGE1O95461 756 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 VNN2O95498 520 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 GCFC2P16383 781 aaKnown RBP15.07■□□□□ 0
SHKBP1-208ENST00000595726 OSTNP61366 133 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 MAPK6Q16659 721 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 UAP1L1Q3KQV9 507 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 ARHGAP29Q52LW3 1261 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 SOWAHCQ53LP3 525 aaPredicted RBP15.07■□□□□ 0
SHKBP1-208ENST00000595726 NT5DC1Q5TFE4 455 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 C19orf48Q6RUI8 117 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 PIK3AP1Q6ZUJ8 805 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 TMEM130Q8N3G9 435 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 LEMD2Q8NC56 503 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 ZMAT2Q96NC0 199 aaKnown RBP15.07■□□□□ 0
SHKBP1-208ENST00000595726 PGLYRP2Q96PD5 576 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 KIFC3Q9BVG8 833 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 CCDC113Q9H0I3 377 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 DNAJC25Q9H1X3 360 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 FBRSL1Q9HCM7 1045 aaKnown RBP15.07■□□□□ 0
SHKBP1-208ENST00000595726 KLK13Q9UKR3 277 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 YIPF1Q9Y548 306 aa15.07■□□□□ 0
SHKBP1-208ENST00000595726 EML5Q05BV3 1969 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 SYN3O14994 580 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms