RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 CENPPQ6IPU0 288 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 ANKRD54Q6NXT1 300 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 SYCE2Q6PIF2 218 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 DSTYKQ6XUX3 929 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 TMEM184AQ6ZMB5 413 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 WDR49Q8IV35 697 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 CSGALNACT2Q8N6G5 542 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 CACTINQ8WUQ7 758 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 TMEM174Q8WUU8 243 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 BORCS6Q96GS4 357 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 ANKRD36BP1Q96IX9 119 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 SENP8Q96LD8 212 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 ASB2Q96Q27 587 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 FNBP1Q96RU3 617 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 NUP62CLQ9H1M0 184 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 FNIP2Q9P278 1114 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 CD207Q9UJ71 328 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 CDY1Q9Y6F8 540 aa14.88□□□□□ -0.03
SHKBP1-207ENST00000595631 GRXCR2A6NFK2 248 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 GOLGA6L22H0YM25 854 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 IL9P15248 144 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 OR1D2P34982 312 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 TAF6P49848 677 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 BFSP1Q12934 665 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 ADAM9Q13443 819 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 MYBPC2Q14324 1141 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 DUOXA2Q1HG44 320 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 EDRF1Q3B7T1 1238 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 C1orf220Q5T0J3 134 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 GPR65Q8IYL9 337 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 PARD3BQ8TEW8 1205 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 ATXN2LQ8WWM7 1075 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 CASP10Q92851 521 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 ELMO3Q96BJ8 720 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 MAN1C1Q9NR34 630 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 ITGA11Q9UKX5 1188 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 FRMD4BQ9Y2L6 1034 aa14.87□□□□□ -0.03
SHKBP1-207ENST00000595631 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 TGM5O43548 720 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 GLUD1P00367 558 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 WEE2P0C1S8 567 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 CCNE1P24864 410 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 ARPP19P56211 112 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 STX17P56962 302 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 MRPL58Q14197 206 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 SV2CQ496J9 727 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 CTXN3Q4LDR2 81 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 RARS2Q5T160 578 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 PTCRAQ6ISU1 281 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 ANKS3Q6ZW76 656 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 TRAPPC11Q7Z392 1133 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 PPFIBP1Q86W92 1011 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 FAM186BQ8IYM0 893 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 ZNF560Q96MR9 790 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 TSG101Q99816 390 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 FBXL5Q9UKA1 691 aa14.86□□□□□ -0.03
SHKBP1-207ENST00000595631 KPNA7A9QM74 516 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 CYB561D2O14569 222 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 PSMA7O14818 248 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 MBTPS2O43462 519 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 TBC1D4O60343 1298 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 CST3P01034 146 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 OR4Q2P0C623 313 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 TRIM49P0CI25 452 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 TRIM49CP0CI26 452 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 SRGAP2BP0DMP2 458 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 ODC1P11926 461 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 RPL13P26373 211 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 RBP5P82980 135 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 ROR1Q01973 937 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 CREMQ03060 361 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 YWHAHQ04917 246 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 STIM1Q13586 685 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 TDRD10Q5VZ19 366 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 WSCD1Q658N2 575 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 ZNF280DQ6N043 979 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 PDXDC1Q6P996 788 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 LILRA6Q6PI73 481 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 ZC3H3Q8IXZ2 948 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 SMRP1Q8NCR6 262 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 APPL2Q8NEU8 664 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 DHTKD1Q96HY7 919 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 NECAB3Q96P71 396 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 DUSP9Q99956 384 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 GTPBP4Q9BZE4 634 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 S1PR5Q9H228 398 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 MMRN2Q9H8L6 949 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 BACE2Q9Y5Z0 518 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 NOTCH4Q99466 2003 aa14.85□□□□□ -0.03
SHKBP1-207ENST00000595631 UNC80Q8N2C7 3258 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 PTPRDP23468 1912 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 XIRP2A4UGR9 3374 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 WDR27A2RRH5 827 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 H7C4K7 107 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 RFPL2O75678 378 aa14.84□□□□□ -0.03
SHKBP1-207ENST00000595631 C4BPAP04003 597 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms