RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CAMK1Q14012 370 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 VWA3BQ502W6 1294 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 FBXL13Q8NEE6 735 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 ELMO3Q96BJ8 720 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 SUSD3Q96L08 255 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 ANP32EQ9BTT0 268 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 NDST4Q9H3R1 872 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 TAB2Q9NYJ8 693 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 LZTS1Q9Y250 596 aa24.27■■□□□ 1.48
SNRNP70-204ENST00000595231 SF3B1O75533 1304 aaKnown RBP eCLIP24.27■■□□□ 1.481e-6■■■■■ 35.2
SNRNP70-204ENST00000595231 RFXAPO00287 272 aa24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 STAU1O95793 577 aaKnown RBP24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 PAX3P23760 479 aa24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 RNF214Q8ND24 703 aa24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 ZNF560Q96MR9 790 aa24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 VRTNQ9H8Y1 702 aa24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 RAB20Q9NX57 234 aa24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 R3HCC1Q9Y3T6 440 aaKnown RBP24.26■■□□□ 1.47
SNRNP70-204ENST00000595231 M0QZQ0 153 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 P4HA2O15460 535 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 TRAPPC3O43617 180 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 LPXNO60711 386 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 ATICP31939 592 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 PIK3CAP42336 1068 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 MYL7Q01449 175 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 UBE3AQ05086 875 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 MYO1EQ12965 1108 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 SGSM1Q2NKQ1 1148 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 SV2CQ496J9 727 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 GDPD5Q8WTR4 605 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 POF1BQ8WVV4 589 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 SENP8Q96LD8 212 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 PI4K2AQ9BTU6 479 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 CHST7Q9NS84 486 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 GDAP2Q9NXN4 497 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 VWA8A3KMH1 1905 aa24.25■■□□□ 1.47
SNRNP70-204ENST00000595231 GOLGA6L19H0YKK7 550 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 N4BP1O75113 896 aaKnown RBP24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 ASS1P00966 412 aaKnown RBP24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 SOD2P04179 222 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 GRIN2CQ14957 1233 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 FAM171A1Q5VUB5 890 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 GPR153Q6NV75 609 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 VPS52Q8N1B4 723 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 LMO3Q8TAP4 145 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 B3GALT6Q96L58 329 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 VPS16Q9H269 839 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 PUF60Q9UHX1 559 aaKnown RBP24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 COPB1P53618 953 aaKnown RBP24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 ERVFC1P60507 584 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 ELAVL2Q12926 359 aaKnown RBP24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 ZNF697Q5TEC3 545 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 STK39Q9UEW8 545 aa24.24■■□□□ 1.47
SNRNP70-204ENST00000595231 FGFR3P22607 806 aa24.23■■□□□ 1.47
SNRNP70-204ENST00000595231 ZNF699Q32M78 642 aa24.23■■□□□ 1.47
SNRNP70-204ENST00000595231 WDR72Q3MJ13 1102 aa24.23■■□□□ 1.47
SNRNP70-204ENST00000595231 SPOPLQ6IQ16 392 aa24.23■■□□□ 1.47
SNRNP70-204ENST00000595231 TAF4BQ92750 862 aa24.23■■□□□ 1.47
SNRNP70-204ENST00000595231 TKTP29401 623 aaKnown RBP24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 FXR1P51114 621 aaKnown RBP eCLIP24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 USP41Q3LFD5 358 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 RTP2Q5QGT7 225 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 DSTYKQ6XUX3 929 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 LIMS2Q7Z4I7 341 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 ANKRD20A12PQ8NF67 263 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 HERC2P3Q9BVR0 1158 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 ZBP1Q9H171 429 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 RBSNQ9H1K0 784 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 PRDM12Q9H4Q4 367 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 APOBEC3GQ9HC16 384 aaKnown RBP24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.22■■□□□ 1.476e-7■■■■■ 40.4
SNRNP70-204ENST00000595231 SNX9Q9Y5X1 595 aa24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 COL4A4P53420 1690 aaPredicted RBP24.22■■□□□ 1.47
SNRNP70-204ENST00000595231 GTPBP10A4D1E9 387 aaKnown RBP24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 CYB561D2O14569 222 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 TPM4P67936 248 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 KIAA0319Q5VV43 1072 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 FAM161BQ96MY7 647 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 TLR9Q9NR96 1032 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 PCDHB8Q9UN66 801 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 TIMM13Q9Y5L4 95 aaPredicted RBP24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 SYN3O14994 580 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 CTSAP10619 480 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 DSG1Q02413 1049 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 CETN1Q12798 172 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 SOWAHAQ2M3V2 549 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 CEP57Q86XR8 500 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 EHBP1Q8NDI1 1231 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 CRACR2AQ9BSW2 395 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 TTPALQ9BTX7 342 aa24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 NXF1Q9UBU9 619 aaKnown RBP24.21■■□□□ 1.47
SNRNP70-204ENST00000595231 MYO7AQ13402 2215 aa24.2■■□□□ 1.46
SNRNP70-204ENST00000595231 LILRB3O75022 631 aa24.2■■□□□ 1.46
SNRNP70-204ENST00000595231 CYP11A1P05108 521 aa24.2■■□□□ 1.46
SNRNP70-204ENST00000595231 IRS1P35568 1242 aa24.2■■□□□ 1.46
SNRNP70-204ENST00000595231 NOP14P78316 857 aaKnown RBP24.2■■□□□ 1.46
SNRNP70-204ENST00000595231 ZNF667Q5HYK9 610 aa24.2■■□□□ 1.46
SNRNP70-204ENST00000595231 TATDN2Q93075 761 aa24.2■■□□□ 1.46
SNRNP70-204ENST00000595231 TCF25Q9BQ70 676 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms