RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 DSEQ9UL01 958 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 OR6C75A6NL08 312 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 PRRG1O14668 218 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 PRPF6O94906 941 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 ABLIM3O94929 683 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 ATF2P15336 505 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 GBP2P32456 591 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 LILRA4P59901 499 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 SURF1Q15526 300 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 CRELD2Q6UXH1 353 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 TCEAL8Q8IYN2 117 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 GPD1LQ8N335 351 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 DPP3Q9NY33 737 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 CGNQ9P2M7 1197 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 ZDHHC9Q9Y397 364 aa19.2■□□□□ 0.66
SHKBP1-204ENST00000594862 ANO9A1A5B4 782 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 TMEM221A6NGB7 291 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 M0R296 226 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 PIRO00625 290 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 LRG1P02750 347 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 CPB1P15086 417 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 FSHRP23945 695 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 TAF6P49848 677 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 RSPO2Q6UXX9 243 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 EPM2AIP1Q7L775 607 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 HS2ST1Q7LGA3 356 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 ZNF507Q8TCN5 953 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 FGFBP2Q9BYJ0 223 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 LIMD1Q9UGP4 676 aa19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 AFF4Q9UHB7 1163 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-204ENST00000594862 ZNF318Q5VUA4 2279 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 WDR27A2RRH5 827 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 PFKFB1P16118 471 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 NUCB2P80303 420 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 EHHADHQ08426 723 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 MYBPC2Q14324 1141 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 SV2CQ496J9 727 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 OVOS1Q6IE37 1185 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 GET4Q7L5D6 327 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 SAAL1Q96ER3 474 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 CCDC34Q96HJ3 373 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 CBWD1Q9BRT8 395 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 KCNH6Q9H252 994 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 POLIQ9UNA4 740 aa19.18■□□□□ 0.66
SHKBP1-204ENST00000594862 FAM237AA0A1B0GTK4 181 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 A0A1W2PQ27 194 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 A0A1W2PQ64 194 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 A0A1W2PQD8 194 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 CCL16O15467 120 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 ACTN4O43707 911 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 CYP11A1P05108 521 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 AFMP43652 599 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 GUCY2FP51841 1108 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 ARPP19P56211 112 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 PSMD2Q13200 908 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 PLD1Q13393 1074 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 TDGQ13569 410 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 BMT2Q1RMZ1 405 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 GRASPQ7Z6J2 395 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 SUGP1Q8IWZ8 645 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 ELMOD1Q8N336 334 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 GOLGA5Q8TBA6 731 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 CCDC47Q96A33 483 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 SENP8Q96LD8 212 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 IKZF4Q9H2S9 585 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 CYP4F11Q9HBI6 524 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 AVENQ9NQS1 362 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 ITGA11Q9UKX5 1188 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 HPSEQ9Y251 543 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 R3HCC1Q9Y3T6 440 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 INSL5Q9Y5Q6 135 aa19.17■□□□□ 0.66
SHKBP1-204ENST00000594862 TSC2P49815 1807 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 ZNF233A6NK53 670 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 TFAMQ00059 246 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 PABPC1LQ4VXU2 614 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 EFCAB13Q8IY85 973 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 LRRC52Q8N7C0 313 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 LEMD2Q8NC56 503 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 FEZF2Q8TBJ5 459 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 NOC3LQ8WTT2 800 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 PBXIP1Q96AQ6 731 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 BLZF1Q9H2G9 400 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 EXOC1Q9NV70 894 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 SERTAD1Q9UHV2 236 aa19.16■□□□□ 0.66
SHKBP1-204ENST00000594862 A0A1B0GVL5 298 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 ASGR2P07307 311 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 TMEM191BP0C7N4 346 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 LAMP2P13473 410 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 SYKP43405 635 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 SMARCB1Q12824 385 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 GPR17Q13304 367 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 CUL4BQ13620 913 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 HFE2Q6ZVN8 426 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 MTSS1LQ765P7 747 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 THEM5Q8N1Q8 247 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 SCFD1Q8WVM8 642 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 HPS3Q969F9 1004 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 PAGE5Q96GU1 130 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 MYADMQ96S97 322 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms