RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 EXTL3O43909 919 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 DIAPH2O60879 1101 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 NR3C2P08235 984 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 FDX1P10109 184 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 MTMR2Q13614 643 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 CCNG2Q16589 344 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 ZACNQ401N2 412 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 LIN9Q5TKA1 542 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 GSTA5Q7RTV2 222 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 ATP6V0A1Q93050 837 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 IFT74Q96LB3 600 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 ZNF570Q96NI8 536 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 RXFP1Q9HBX9 757 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 APOBEC3GQ9HC16 384 aaKnown RBP17.5■□□□□ 0.39
LIG1-206ENST00000594067 BATF3Q9NR55 127 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 RNF146Q9NTX7 359 aa17.5■□□□□ 0.39
LIG1-206ENST00000594067 GSTTP1A0A1W2PQM5 241 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 DGAT1O75907 488 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 C4BPAP04003 597 aaKnown RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 CCND2P30279 289 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 STX2P32856 288 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 BPIFB4P59827 614 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 MAMLD1Q13495 774 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 CGB2Q6NT52 195 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 CYP4F22Q6NT55 531 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 ATG4CQ96DT6 458 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 RMDN2Q96LZ7 410 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 TGS1Q96RS0 853 aaKnown RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 TRIM6Q9C030 488 aaPredicted RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 PDLIM7Q9NR12 457 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 TRIM33Q9UPN9 1127 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 PI4K2BG5E9Z4 385 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 HGSO14964 777 aaPredicted RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 PSTPIP1O43586 416 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 VNN1O95497 513 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 MSH2P43246 934 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 NOMO3P69849 1222 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 PRKCEQ02156 737 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 MGAT5Q09328 741 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 PTP4A2Q12974 167 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 MTERF2Q49AM1 385 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 ATP13A4Q4VNC1 1196 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 BZW1Q7L1Q6 419 aaKnown RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIG1-206ENST00000594067 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 CCDC89Q8N998 374 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 MCPH1Q8NEM0 835 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 ZBTB45Q96K62 511 aaPredicted RBP17.49■□□□□ 0.39
LIG1-206ENST00000594067 CYP26B1Q9NR63 512 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 ARHGAP28Q9P2N2 729 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 STK38LQ9Y2H1 464 aa17.49■□□□□ 0.39
LIG1-206ENST00000594067 TCEA3O75764 348 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 NEBLO76041 1014 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 GNA15P30679 374 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 PSMD6Q15008 389 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 ZFYVE27Q5T4F4 411 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 KAZNQ674X7 775 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 ERICH1Q86X53 443 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 PLCD4Q9BRC7 762 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 TLR3O15455 904 aaKnown RBP17.48■□□□□ 0.39
LIG1-206ENST00000594067 KRT10P13645 584 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 KCNA2P16389 499 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 CUL2Q13617 745 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 P3H1Q32P28 736 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 DHX37Q8IY37 1157 aaKnown RBP17.48■□□□□ 0.39
LIG1-206ENST00000594067 KATNAL2Q8IYT4 538 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 ABRAQ8N0Z2 381 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 ANKLE1Q8NAG6 615 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 GLIS1Q8NBF1 620 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 MTMR14Q8NCE2 650 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 GPRASP2Q96D09 838 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 SENP7Q9BQF6 1050 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 LGALS13Q9UHV8 139 aa17.48■□□□□ 0.39
LIG1-206ENST00000594067 AGO2Q9UKV8 859 aaKnown RBP17.48■□□□□ 0.39
LIG1-206ENST00000594067 CDH16O75309 829 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 RGS20O76081 388 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 PSAPP07602 524 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 TCF4P15884 667 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 TMED2Q15363 201 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 ZBTB41Q5SVQ8 909 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 TMEM143Q96AN5 459 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 RBM15Q96T37 977 aaKnown RBP eCLIP17.47■□□□□ 0.398e-6■□□□□ 8.4
LIG1-206ENST00000594067 HAPLN2Q9GZV7 340 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 NKIRAS1Q9NYS0 192 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 VWA5AO00534 786 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 SKAP2O75563 359 aaPredicted RBP17.47■□□□□ 0.39
LIG1-206ENST00000594067 KLRC2P26717 231 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 MAGEA4P43358 317 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 SCARA3Q6AZY7 606 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 TTLL6Q8N841 843 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 CCDC77Q9BR77 488 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms