RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 IRF7Q92985 503 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 CEP72Q9P209 647 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 ODF2LQ9ULJ1 636 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 DNAH14Q0VDD8 3507 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 TTC26A0AVF1 554 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 M0QZQ0 153 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 MAN2B1O00754 1011 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 HNRNPDLO14979 420 aaKnown RBP24.65■■□□□ 1.54
SSBP4-203ENST00000593641 PSMC3P17980 439 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 CYP3A5P20815 502 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 PLD1Q13393 1074 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 C8orf34Q49A92 452 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 RNF19BQ6ZMZ0 732 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 HAUS6Q7Z4H7 955 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 USP37Q86T82 979 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 HS6ST3Q8IZP7 471 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 DEPDC1BQ8WUY9 529 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 AK8Q96MA6 479 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 YIPF1Q9Y548 306 aa24.65■■□□□ 1.54
SSBP4-203ENST00000593641 ANK1P16157 1881 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 OAZ2O95190 189 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 SCP2P22307 547 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 GJB2P29033 226 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 DSTYKQ6XUX3 929 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 SUMF1Q8NBK3 374 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 RMDN1Q96DB5 314 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 CALML4Q96GE6 196 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 PGLYRP2Q96PD5 576 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 HAPLN2Q9GZV7 340 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 SLITRK6Q9H5Y7 841 aa24.64■■□□□ 1.54
SSBP4-203ENST00000593641 NDRG2Q9UN36 371 aaKnown RBP24.64■■□□□ 1.54
SSBP4-203ENST00000593641 TIMM13Q9Y5L4 95 aaPredicted RBP24.64■■□□□ 1.54
SSBP4-203ENST00000593641 K7ENM7 598 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 SLC26A4O43511 780 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 GDI1P31150 447 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 UBA7P41226 1012 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 TNFSF9P41273 254 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 EPHA5P54756 1037 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 ARSHQ5FYA8 562 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 VITQ6UXI7 678 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 BEST2Q8NFU1 509 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 ZSCAN18Q8TBC5 510 aaPredicted RBP24.63■■□□□ 1.53
SSBP4-203ENST00000593641 KCNN1Q92952 543 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 ZSWIM3Q96MP5 696 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 REEP2Q9BRK0 252 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 GPR88Q9GZN0 384 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 RPF1Q9H9Y2 349 aaKnown RBP24.63■■□□□ 1.53
SSBP4-203ENST00000593641 ZSCAN32Q9NX65 697 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 NCDNQ9UBB6 729 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 COL4A2P08572 1712 aa24.63■■□□□ 1.53
SSBP4-203ENST00000593641 OR6C75A6NL08 312 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 OGTO15294 1046 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 FAM13AO94988 1023 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 GJA1P17302 382 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 AARSP49588 968 aaKnown RBP eCLIP24.62■■□□□ 1.53
SSBP4-203ENST00000593641 ZBTB6Q15916 424 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 GPBP1Q86WP2 473 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 TMEM130Q8N3G9 435 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 DCLK2Q8N568 766 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 MYCT1Q8N699 235 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 RASSF8Q8NHQ8 419 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 TMX3Q96JJ7 454 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 TSPAN18Q96SJ8 248 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 PARVGQ9HBI0 331 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 ZNF334Q9HCZ1 680 aaPredicted RBP24.62■■□□□ 1.53
SSBP4-203ENST00000593641 PRMT8Q9NR22 394 aaPredicted RBP24.62■■□□□ 1.53
SSBP4-203ENST00000593641 TBX20Q9UMR3 447 aa24.62■■□□□ 1.53
SSBP4-203ENST00000593641 LACTBL1A8MY62 500 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 NRG2O14511 850 aaPredicted RBP24.61■■□□□ 1.53
SSBP4-203ENST00000593641 ZNF263O14978 683 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 MOSPD3O75425 235 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 OR4Q2P0C623 313 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 VIPR2P41587 438 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 EPHB3P54753 998 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 DHX8Q14562 1220 aaKnown RBP24.61■■□□□ 1.53
SSBP4-203ENST00000593641 TEAD2Q15562 447 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 ENOX2Q16206 610 aaKnown RBP24.61■■□□□ 1.53
SSBP4-203ENST00000593641 OVOS1Q6IE37 1185 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 MAP4K3Q8IVH8 894 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 ZBTB44Q8NCP5 570 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 SECISBP2LQ93073 1101 aaKnown RBP24.61■■□□□ 1.53
SSBP4-203ENST00000593641 TRPV5Q9NQA5 729 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 PIAS3Q9Y6X2 628 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 TCHHQ07283 1943 aa24.61■■□□□ 1.53
SSBP4-203ENST00000593641 PIGRP01833 764 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 KRT18P05783 430 aaKnown RBP24.6■■□□□ 1.53
SSBP4-203ENST00000593641 TYMPP19971 482 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 ALDH1A3P47895 512 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 GUCY2FP51841 1108 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 DUSP4Q13115 394 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 MTAPQ13126 283 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 GPR17Q13304 367 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 TSSK4Q6SA08 328 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 DGLUCYQ7Z3D6 616 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 SHKBP1Q8TBC3 707 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 FAM3CQ92520 227 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 E2F7Q96AV8 911 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 FAM212AQ96EL1 285 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 IER2Q9BTL4 223 aa24.6■■□□□ 1.53
SSBP4-203ENST00000593641 MSTO1Q9BUK6 570 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms