RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 LIG4P49917 911 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 PPP2R3AQ06190 1150 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 ERMP1Q7Z2K6 904 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 HS6ST3Q8IZP7 471 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 TSPAN18Q96SJ8 248 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 MRPS17Q9Y2R5 130 aaKnown RBP26.03■■□□□ 1.76
LSM4-202ENST00000593564 GPR179Q6PRD1 2367 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 HNRNPDLO14979 420 aaKnown RBP26.02■■□□□ 1.76
LSM4-202ENST00000593564 XPOTO43592 962 aaKnown RBP26.02■■□□□ 1.76
LSM4-202ENST00000593564 MOSPD3O75425 235 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 UBA7P41226 1012 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 RPS9P46781 194 aaKnown RBP26.02■■□□□ 1.76
LSM4-202ENST00000593564 ZNF131P52739 623 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 ENOX2Q16206 610 aaKnown RBP26.02■■□□□ 1.76
LSM4-202ENST00000593564 GPBP1Q86WP2 473 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 SMARCD2Q92925 531 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 CALML4Q96GE6 196 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 TRMT61BQ9BVS5 477 aaKnown RBP26.02■■□□□ 1.76
LSM4-202ENST00000593564 BRD9Q9H8M2 597 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 ASAH2Q9NR71 780 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 TBX20Q9UMR3 447 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 YIPF1Q9Y548 306 aa26.02■■□□□ 1.76
LSM4-202ENST00000593564 SHISA7A6NL88 538 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 LACTBL1A8MY62 500 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 CACNA1AO00555 2505 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 OGTO15294 1046 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 KINO60870 393 aaKnown RBP26.01■■□□□ 1.75
LSM4-202ENST00000593564 CD2BP2O95400 341 aaKnown RBP26.01■■□□□ 1.75
LSM4-202ENST00000593564 ADRB2P07550 413 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 F5P12259 2224 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 GRM2Q14416 872 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 LRRC15Q8TF66 581 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 RUBCNQ92622 972 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 ZSWIM3Q96MP5 696 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 PARVGQ9HBI0 331 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 BLOC1S4Q9NUP1 217 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 DMXL1Q9Y485 3027 aa26.01■■□□□ 1.75
LSM4-202ENST00000593564 TIMM13Q9Y5L4 95 aaPredicted RBP26.01■■□□□ 1.75
LSM4-202ENST00000593564 OR6C75A6NL08 312 aa26■■□□□ 1.75
LSM4-202ENST00000593564 K7ENM7 598 aa26■■□□□ 1.75
LSM4-202ENST00000593564 FAM13AO94988 1023 aa26■■□□□ 1.75
LSM4-202ENST00000593564 USP37Q86T82 979 aa26■■□□□ 1.75
LSM4-202ENST00000593564 MAP4K3Q8IVH8 894 aa26■■□□□ 1.75
LSM4-202ENST00000593564 MYCT1Q8N699 235 aa26■■□□□ 1.75
LSM4-202ENST00000593564 SUMF1Q8NBK3 374 aa26■■□□□ 1.75
LSM4-202ENST00000593564 IRF7Q92985 503 aa26■■□□□ 1.75
LSM4-202ENST00000593564 RPF1Q9H9Y2 349 aaKnown RBP26■■□□□ 1.75
LSM4-202ENST00000593564 TRPV4Q9HBA0 871 aa26■■□□□ 1.75
LSM4-202ENST00000593564 TRPV5Q9NQA5 729 aa26■■□□□ 1.75
LSM4-202ENST00000593564 PCDHGA2Q9Y5H1 932 aa26■■□□□ 1.75
LSM4-202ENST00000593564 PATJQ8NI35 1801 aa26■■□□□ 1.75
LSM4-202ENST00000593564 A0A0B4J269 797 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 SPTLC1O15269 473 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 VNN2O95498 520 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 BMP15O95972 392 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 MYL4P12829 197 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 PSMC3P17980 439 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 TYMPP19971 482 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 MCM2P49736 904 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 GUCY2FP51841 1108 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 CSTF1Q05048 431 aaKnown RBP25.99■■□□□ 1.75
LSM4-202ENST00000593564 GPR17Q13304 367 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 PLD1Q13393 1074 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 FZD5Q13467 585 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 VITQ6UXI7 678 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 DSTYKQ6XUX3 929 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 DEPDC1BQ8WUY9 529 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 SMC3Q9UQE7 1217 aa25.99■■□□□ 1.75
LSM4-202ENST00000593564 MAN2B1O00754 1011 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 OR4Q2P0C623 313 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 DHX8Q14562 1220 aaKnown RBP25.98■■□□□ 1.75
LSM4-202ENST00000593564 SPATA1Q5VX52 437 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 CD302Q8IX05 232 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 KIAA2013Q8IYS2 634 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 ZNF687Q8N1G0 1237 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 SHKBP1Q8TBC3 707 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 ZSCAN18Q8TBC5 510 aaPredicted RBP25.98■■□□□ 1.75
LSM4-202ENST00000593564 PGLYRP2Q96PD5 576 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 HINFPQ9BQA5 517 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 MSTO1Q9BUK6 570 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 GPR88Q9GZN0 384 aa25.98■■□□□ 1.75
LSM4-202ENST00000593564 ZNF334Q9HCZ1 680 aaPredicted RBP25.98■■□□□ 1.75
LSM4-202ENST00000593564 PRMT8Q9NR22 394 aaPredicted RBP25.98■■□□□ 1.75
LSM4-202ENST00000593564 TRAK2O60296 914 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 GJA1P17302 382 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 PLCG1P19174 1290 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 PAX3P23760 479 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 GDI1P31150 447 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 ABCD1P33897 745 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 LONP1P36776 959 aaKnown RBP25.97■■□□□ 1.75
LSM4-202ENST00000593564 VIPR2P41587 438 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 MYBPC2Q14324 1141 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 MCM6Q14566 821 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 TEAD2Q15562 447 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 LARP1BQ659C4 914 aaKnown RBP25.97■■□□□ 1.75
LSM4-202ENST00000593564 OVOS1Q6IE37 1185 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 SLC39A4Q6P5W5 647 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 RAD54LQ92698 747 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 NELL1Q92832 810 aa25.97■■□□□ 1.75
LSM4-202ENST00000593564 FIZ1Q96SL8 496 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms