RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 TMEM109Q9BVC6 243 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ELP3Q9H9T3 547 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ATXN2Q99700 1313 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ADM5C9JUS6 153 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 TLR3O15455 904 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 RGS16O15492 202 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 FAM189A1O60320 539 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 LGR5O75473 907 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 CNMDO75829 334 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 SRGAP2CP0DJJ0 459 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ITIH2P19823 946 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 TMOD1P28289 359 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 MAPK6Q16659 721 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 C6orf118Q5T5N4 469 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 KATNAL2Q8IYT4 538 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 RNF149Q8NC42 400 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 C3orf20Q8ND61 904 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 FEZF2Q8TBJ5 459 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ZNF606Q8WXB4 792 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ATG4AQ8WYN0 398 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 OTUD5Q96G74 571 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 SNF8Q96H20 258 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 MTMR12Q9C0I1 747 aa17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ASCC2Q9H1I8 757 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 ADARB2Q9NS39 739 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-217ENST00000592741 GMNCA6NCL1 334 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 IRF6O14896 467 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 ARIH2O95376 493 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 RALAP11233 206 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 SSR1P43307 286 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 MCL1Q07820 350 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 CELF3Q5SZQ8 465 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 TRMT10CQ7L0Y3 403 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 CCDC25Q86WR0 208 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 FAM212AQ96EL1 285 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 CCDC114Q96M63 670 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 JPH2Q9BR39 696 aaPredicted RBP17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 STMN4Q9H169 189 aaPredicted RBP17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 IP6K2Q9UHH9 426 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 USTQ9Y2C2 406 aa17.61■□□□□ 0.41
PRKCSH-217ENST00000592741 TLDC2A0PJX2 215 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 TRAPPC3O43617 180 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 CST3P01034 146 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 CALB1P05937 261 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 TAS2R40P59535 323 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 TRPC3Q13507 836 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 DUOXA2Q1HG44 320 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 DAB2IPQ5VWQ8 1189 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 PLPPR4Q7Z2D5 763 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 ATL2Q8NHH9 583 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 EXD1Q8NHP7 514 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 HERPUD2Q9BSE4 406 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 NIF3L1Q9GZT8 377 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 A0A087WUV0 522 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 KIAA0754O94854 1291 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 LSM8O95777 96 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 AGTP01019 485 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 ATF2P15336 505 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 MMP8P22894 467 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 CETN2P41208 172 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 MYL6P60660 151 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 CAV1Q03135 178 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 KLF1Q13351 362 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 SGSM1Q2NKQ1 1148 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 TRIM50Q86XT4 487 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 LRRC71Q8N4P6 559 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 PPM1EQ8WY54 764 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 HEMGNQ9BXL5 484 aa17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 CPSF3Q9UKF6 684 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-217ENST00000592741 IGKV6-21A0A0C4DH24 114 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 SMIM23A6NLE4 172 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 CXCL11O14625 94 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 PGK2P07205 417 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 CD58P19256 250 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 GJC1P36383 396 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 PPARDQ03181 441 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 TFDP1Q14186 410 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 PLCB4Q15147 1175 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 CCNG2Q16589 344 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 HSDL1Q3SXM5 330 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 ERO1BQ86YB8 467 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 RAPGEF5Q92565 580 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 OSBPL8Q9BZF1 889 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 R3HDM2Q9Y2K5 976 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 ZBTB42B2RXF5 422 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 O00370 1275 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 SOCS7O14512 581 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 DDNO94850 711 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 TMEM191BP0C7N4 346 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 RHBDF2Q6PJF5 856 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 MPZL3Q6UWV2 235 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 TMEM35BQ8NCS4 154 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 UHMK1Q8TAS1 419 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 CENPTQ96BT3 561 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 FGD4Q96M96 766 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 SPATA33Q96N06 139 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 SCLT1Q96NL6 688 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 CISHQ9NSE2 258 aa17.59■□□□□ 0.41
PRKCSH-217ENST00000592741 GGA2Q9UJY4 613 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms