RNA–Protein interactions for RNA: ENST00000592647.1

TRAPPC6A-205, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 514 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-205ENST00000592647 TPM4P67936 248 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 UPP1Q16831 310 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TDRD10Q5VZ19 366 aaKnown RBP23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 DCLRE1AQ6PJP8 1040 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 SV2AQ7L0J3 742 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PABPC5Q96DU9 382 aaKnown RBP23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TUBGCP2Q9BSJ2 902 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 HSD3B7Q9H2F3 369 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ITGA11Q9UKX5 1188 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 FAM50BQ9Y247 325 aa23.13■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TADA2AO75478 443 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 B3GAT3O94766 335 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CST3P01034 146 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PRKCSHP14314 528 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 EEF1GP26641 437 aaKnown RBP23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 MCCD1P59942 119 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 RBP5P82980 135 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 KCNH2Q12809 1159 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TRPC3Q13507 836 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TCEAL5Q5H9L2 206 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 EP400NLQ6ZTU2 488 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 NSUN3Q9H649 340 aaKnown RBP23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TMEM8AQ9HCN3 771 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TAB2Q9NYJ8 693 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 SPG21Q9NZD8 308 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 SIX4Q9UIU6 781 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 RWDD3Q9Y3V2 267 aa23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PES1O00541 588 aaKnown RBP23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CLSTN1O94985 981 aa23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 KIF4AO95239 1232 aa23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 AFPP02771 609 aaKnown RBP23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 GTF2H1P32780 548 aa23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 KRT39Q6A163 491 aa23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TMEM173Q86WV6 379 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 SLC39A11Q8N1S5 342 aa23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 KLHL23Q8NBE8 558 aa23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ANKRD20A12PQ8NF67 263 aa23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 BCL7CQ8WUZ0 217 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PDCD11Q14690 1871 aaKnown RBP23.11■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ANO9A1A5B4 782 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PIRO00625 290 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 VNN1O95497 513 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ITGB1P05556 798 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ATP1A3P13637 1013 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ZNF18P17022 549 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 FMO5P49326 533 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 MXI1P50539 228 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 KRT31Q15323 416 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 MAN2A1Q16706 1144 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ZACNQ401N2 412 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CBWD6Q4V339 395 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CBWD3Q5JTY5 395 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CBWD5Q5RIA9 395 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 GAS2L3Q86XJ1 694 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 C3orf58Q8NDZ4 430 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 IGSF21Q96ID5 467 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 VPS16Q9H269 839 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 MARCH5Q9NX47 278 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 NUB1Q9Y5A7 615 aa23.1■■□□□ 1.29
TRAPPC6A-205ENST00000592647 DCXO43602 365 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 FGF18O76093 207 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 HLA-DRAP01903 254 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PIK3CAP42336 1068 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 BRCC3P46736 316 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 MYL6P60660 151 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 NCOA4Q13772 614 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 COL19A1Q14993 1142 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 VWA3BQ502W6 1294 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CD300LGQ6UXG3 332 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 C15orf39Q6ZRI6 1047 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CXorf38Q8TB03 319 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ELMO3Q96BJ8 720 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TMEM169Q96HH4 297 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PRKAG3Q9UGI9 489 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ADAM28Q9UKQ2 775 aa23.09■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CARNS1A5YM72 827 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 I3L4J1 428 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TPM2P07951 284 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PPM1AP35813 382 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 MYL7Q01449 175 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 KRT17Q04695 432 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 TAS1R2Q8TE23 839 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 HPDLQ96IR7 371 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 PLVAPQ9BX97 442 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 RBSNQ9H1K0 784 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 ALG13Q9NP73 1137 aaKnown RBP23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 CLDND1Q9NY35 253 aa23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 LIMA1Q9UHB6 759 aaKnown RBP23.08■■□□□ 1.29
TRAPPC6A-205ENST00000592647 BRWD1Q9NSI6 2320 aa23.08■■□□□ 1.28
TRAPPC6A-205ENST00000592647 SPTLC1O15269 473 aa23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 NCK2O43639 380 aa23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 N4BP1O75113 896 aaKnown RBP23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 RB1P06400 928 aa23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 TAF6P49848 677 aa23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 COPB1P53618 953 aaKnown RBP23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 LILRA4P59901 499 aa23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 ZP2Q05996 745 aa23.07■■□□□ 1.28
TRAPPC6A-205ENST00000592647 MYO1EQ12965 1108 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms