RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 TMEM270Q6UE05 265 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 SCARA5Q6ZMJ2 495 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 DNAAF5Q86Y56 855 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 BEST2Q8NFU1 509 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 DDX1Q92499 740 aaKnown RBP12.2□□□□□ -0.46
TUBD1-211ENST00000591548 BCO2Q9BYV7 579 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 CISHQ9NSE2 258 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
TUBD1-211ENST00000591548 PDCD11Q14690 1871 aaKnown RBP12.2□□□□□ -0.46
TUBD1-211ENST00000591548 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 PIRO00625 290 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 FANCGO15287 622 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 PJA2O43164 708 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 NBNO60934 754 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 CD58P19256 250 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 TNFAIP3P21580 790 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 MLH1P40692 756 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 RAB27AP51159 221 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 ZNF132P52740 706 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 ETF1P62495 437 aaKnown RBP12.19□□□□□ -0.46
TUBD1-211ENST00000591548 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 DNTTIP2Q5QJE6 756 aaKnown RBP12.19□□□□□ -0.46
TUBD1-211ENST00000591548 CCDC122Q5T0U0 273 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 C1orf53Q5VUE5 145 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 TAF3Q5VWG9 929 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 C9orf57Q5W0N0 161 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 HACE1Q8IYU2 909 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
TUBD1-211ENST00000591548 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
TUBD1-211ENST00000591548 LINC01599Q8WXQ3 324 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 FAXDC2Q96IV6 333 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
TUBD1-211ENST00000591548 PCDHB18PQ96TA0 734 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 GAD1Q99259 594 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 PACSIN1Q9BY11 444 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 SDCBP2Q9H190 292 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 GOLGA2P5Q9HBQ8 144 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 RGS18Q9NS28 235 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 MIOSQ9NXC5 875 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 GUCA1BQ9UMX6 200 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 GIT1Q9Y2X7 761 aa12.19□□□□□ -0.46
TUBD1-211ENST00000591548 ARL5CA6NH57 179 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 TLR3O15455 904 aaKnown RBP12.18□□□□□ -0.46
TUBD1-211ENST00000591548 KRT86O43790 486 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 MMEP08473 750 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 CYP3A5P20815 502 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 RAP1GAPP47736 663 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 PDE6CP51160 858 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 CDH8P55286 799 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 FMO1Q01740 532 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 CDR2Q01850 454 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 TLE2Q04725 743 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 KIF5AQ12840 1032 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 C10orf76Q5T2E6 689 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 SYT10Q6XYQ8 523 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 ZNF598Q86UK7 904 aaKnown RBP12.18□□□□□ -0.46
TUBD1-211ENST00000591548 LRRC52Q8N7C0 313 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 TOX2Q96NM4 488 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 WDR24Q96S15 920 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 SMYD3Q9H7B4 428 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 TAS2R14Q9NYV8 317 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
TUBD1-211ENST00000591548 DCDC2CA8MYV0 355 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 C9IYK1 514 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 KIF2AO00139 706 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-211ENST00000591548 XPOTO43592 962 aaKnown RBP12.18□□□□□ -0.46
TUBD1-211ENST00000591548 BPIFB4P59827 614 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 GNG11P61952 73 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 MYO1EQ12965 1108 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 SMYD5Q6GMV2 418 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 RNF169Q8NCN4 708 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 SEPT11Q9NVA2 429 aaKnown RBP12.18□□□□□ -0.46
TUBD1-211ENST00000591548 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
TUBD1-211ENST00000591548 FAM170AA1A519 330 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 TMCO5BA8MYB1 307 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 SPTLC1O15269 473 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 KIF5CO60282 957 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 TUBB4AP04350 444 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 THP07101 528 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 CFHP08603 1231 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 SKIP12755 728 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 P4HA1P13674 534 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-211ENST00000591548 LRPAP1P30533 357 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 GNA15P30679 374 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 SCNN1GP51170 649 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 FAM189BP81408 668 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 ZNF394Q53GI3 561 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 SLC24A5Q71RS6 500 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 DBF4BQ8NFT6 615 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 PGBD4Q96DM1 585 aa12.17□□□□□ -0.46
TUBD1-211ENST00000591548 PAWRQ96IZ0 340 aaKnown RBP12.17□□□□□ -0.46
TUBD1-211ENST00000591548 ZSWIM1Q9BR11 485 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms