RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 USP38Q8NB14 1042 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
GCDH-212ENST00000590530 GAD1Q99259 594 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 TMEM106CQ9BVX2 250 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 C1orf112Q9NSG2 853 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 DPP3Q9NY33 737 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 POLIQ9UNA4 740 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 C2CD2Q9Y426 696 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 CTAGE9A4FU28 777 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 CLSTN1O94985 981 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 ITGA4P13612 1032 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 TRPC3Q13507 836 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 MRPL10Q7Z7H8 261 aaKnown RBP18.2■□□□□ 0.5
GCDH-212ENST00000590530 SLC30A5Q8TAD4 765 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 VWCEQ96DN2 955 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 TOX2Q96NM4 488 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 NAPGQ99747 312 aaPredicted RBP18.2■□□□□ 0.5
GCDH-212ENST00000590530 PRDM10Q9NQV6 1147 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 NAGPAQ9UK23 515 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 TBX21Q9UL17 535 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 AGAP1Q9UPQ3 857 aa18.2■□□□□ 0.5
GCDH-212ENST00000590530 A0A0U1RQF3 1178 aa18.19■□□□□ 0.5
GCDH-212ENST00000590530 CTIFO43310 598 aaKnown RBP18.19■□□□□ 0.5
GCDH-212ENST00000590530 URI1O94763 535 aaPredicted RBP18.19■□□□□ 0.5
GCDH-212ENST00000590530 TUBB2AQ13885 445 aa18.19■□□□□ 0.5
GCDH-212ENST00000590530 WDR44Q5JSH3 913 aa18.19■□□□□ 0.5
GCDH-212ENST00000590530 CD302Q8IX05 232 aa18.19■□□□□ 0.5
GCDH-212ENST00000590530 TUBB2BQ9BVA1 445 aa18.19■□□□□ 0.5
GCDH-212ENST00000590530 TRIP11Q15643 1979 aa18.19■□□□□ 0.5
GCDH-212ENST00000590530 BTNL10A8MVZ5 291 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 DDX3XO00571 662 aaKnown RBP eCLIP18.18■□□□□ 0.51e-7■■□□□ 11.8
GCDH-212ENST00000590530 USP8P40818 1118 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 PLEKHG4Q58EX7 1191 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 SCARA5Q6ZMJ2 495 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 RNF10Q8N5U6 811 aaKnown RBP18.18■□□□□ 0.5
GCDH-212ENST00000590530 TRAIPQ9BWF2 469 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 INTUQ9ULD6 942 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 DUSP10Q9Y6W6 482 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 ARL5CA6NH57 179 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 C9IYK1 514 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 CYP26A1O43174 497 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 ZNF623O75123 536 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 SLU7O95391 586 aaKnown RBP18.18■□□□□ 0.5
GCDH-212ENST00000590530 KCNE1P15382 129 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 ACO1P21399 889 aaKnown RBP18.18■□□□□ 0.5
GCDH-212ENST00000590530 CUL2Q13617 745 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 SGSM1Q2NKQ1 1148 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 SMYD5Q6GMV2 418 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 ALKBH5Q6P6C2 394 aaKnown RBP18.18■□□□□ 0.5
GCDH-212ENST00000590530 DEFB128Q7Z7B8 93 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 ZNF598Q86UK7 904 aaKnown RBP18.18■□□□□ 0.5
GCDH-212ENST00000590530 DNAAF5Q86Y56 855 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 ECHDC2Q86YB7 292 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 TRIM58Q8NG06 486 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 LNX1Q8TBB1 728 aaPredicted RBP18.18■□□□□ 0.5
GCDH-212ENST00000590530 RABGGTAQ92696 567 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 TMEM39AQ9NV64 488 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 NXF1Q9UBU9 619 aaKnown RBP18.18■□□□□ 0.5
GCDH-212ENST00000590530 MRFAP1Q9Y605 127 aa18.18■□□□□ 0.5
GCDH-212ENST00000590530 CITO14578 2027 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 TET1Q8NFU7 2136 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 ANO9A1A5B4 782 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 MACROD2A1Z1Q3 448 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 TRIM43BA6NCK2 446 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 WEE2P0C1S8 567 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 ASPAP45381 313 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 RAP1GAPP47736 663 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 SCNN1GP51170 649 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 TRIM43Q96BQ3 446 aaPredicted RBP18.17■□□□□ 0.5
GCDH-212ENST00000590530 PPP1R10Q96QC0 940 aaKnown RBP18.17■□□□□ 0.5
GCDH-212ENST00000590530 SDCBP2Q9H190 292 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 DERAQ9Y315 318 aa18.17■□□□□ 0.5
GCDH-212ENST00000590530 RALGAPA2Q2PPJ7 1873 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 TACC1O75410 805 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 CDH8P55286 799 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 WDR72Q3MJ13 1102 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 NECAB2Q7Z6G3 386 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 SLC20A1Q8WUM9 679 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 ALS2CR12Q96Q35 445 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 AGPAT1Q99943 283 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 SCN5AQ14524 2016 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 ENPP3O14638 875 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 POMCP01189 267 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 CLTBP09497 229 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 SLC47A2Q86VL8 602 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 NT5DC4Q86YG4 428 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 GLYCTKQ8IVS8 523 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 EPS8L1Q8TE68 723 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 HPDLQ96IR7 371 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 NOX5Q96PH1 765 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 TSPYL2Q9H2G4 693 aaPredicted RBP18.16■□□□□ 0.5
GCDH-212ENST00000590530 NOCTQ9UK39 431 aaKnown RBP18.16■□□□□ 0.5
GCDH-212ENST00000590530 ITGA11Q9UKX5 1188 aa18.16■□□□□ 0.5
GCDH-212ENST00000590530 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
GCDH-212ENST00000590530 SPTLC1O15269 473 aa18.15■□□□□ 0.5
GCDH-212ENST00000590530 FGFR1P11362 822 aa18.15■□□□□ 0.5
GCDH-212ENST00000590530 CD58P19256 250 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms