RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 BAP1Q92560 729 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 ZNF689Q96CS4 500 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-211ENST00000590239 SLC9A7Q96T83 725 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 TMEM175Q9BSA9 504 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-211ENST00000590239 NLRC4Q9NPP4 1024 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 GDAP2Q9NXN4 497 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
DDX39A-211ENST00000590239 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.2
DDX39A-211ENST00000590239 CASTOR2A6NHX0 329 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-211ENST00000590239 CLSTN1O94985 981 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 KRT9P35527 623 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 MAGEA10P43363 369 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-211ENST00000590239 CLCNKBP51801 687 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 JAM2P57087 298 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 LILRA4P59901 499 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 TNNC1P63316 161 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 ARID5BQ14865 1188 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 WDR72Q3MJ13 1102 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 RRAGAQ7L523 313 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 FMNL3Q8IVF7 1028 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 SYN2Q92777 582 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-211ENST00000590239 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 NRDE2Q9H7Z3 1164 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 CYP3A43Q9HB55 503 aa16.27■□□□□ 0.2
DDX39A-211ENST00000590239 RC3H2Q9HBD1 1191 aaKnown RBP16.27■□□□□ 0.2
DDX39A-211ENST00000590239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.23e-6■■■■■ 28.8
DDX39A-211ENST00000590239 CXXC1Q9P0U4 656 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-211ENST00000590239 CARNS1A5YM72 827 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 KPNA7A9QM74 516 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 TMEM189-UBE2V1I3L0A0 370 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 B4GALT3O60512 393 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 GJB5O95377 273 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 ASPAP45381 313 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 YWHAEP62258 255 aaKnown RBP16.26■□□□□ 0.19
DDX39A-211ENST00000590239 HTRA4P83105 476 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-211ENST00000590239 RAPGEF1Q13905 1077 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-211ENST00000590239 PDXDC1Q6P996 788 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 TTC39CQ8N584 583 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 TC2NQ8N9U0 490 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 OR8K1Q8NGG5 319 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 SHC3Q92529 594 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 SPAG5Q96R06 1193 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 PANX2Q96RD6 677 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 DNAJC7Q99615 494 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 PAAF1Q9BRP4 392 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 NXF1Q9UBU9 619 aaKnown RBP16.26■□□□□ 0.19
DDX39A-211ENST00000590239 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-211ENST00000590239 COL4A6Q14031 1691 aa16.26■□□□□ 0.19
DDX39A-211ENST00000590239 FNDC1Q4ZHG4 1894 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-211ENST00000590239 F8VZ95 297 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 SPTLC1O15269 473 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 B3GAT3O94766 335 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 ALDH2P05091 517 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
DDX39A-211ENST00000590239 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 HNRNPH3P31942 346 aaKnown RBP16.25■□□□□ 0.19
DDX39A-211ENST00000590239 STAT1P42224 750 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 AARSP49588 968 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■■■ 30.9
DDX39A-211ENST00000590239 ADKP55263 362 aaKnown RBP16.25■□□□□ 0.19
DDX39A-211ENST00000590239 ARHGAP44Q17R89 818 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 TSR1Q2NL82 804 aaKnown RBP16.25■□□□□ 0.19
DDX39A-211ENST00000590239 PAN2Q504Q3 1202 aaKnown RBP16.25■□□□□ 0.19
DDX39A-211ENST00000590239 CCDC186Q7Z3E2 898 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 LIMS2Q7Z4I7 341 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 HERC6Q8IVU3 1022 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 KAT5Q92993 513 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 ELMO3Q96BJ8 720 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 YME1L1Q96TA2 773 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 COLEC11Q9BWP8 271 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 CACNG4Q9UBN1 327 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 DNAJB4Q9UDY4 337 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 POLIQ9UNA4 740 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 INSL6Q9Y581 213 aa16.25■□□□□ 0.19
DDX39A-211ENST00000590239 LRRC53A6NM62 1247 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 ATP2A2P16615 1042 aaKnown RBP16.24■□□□□ 0.19
DDX39A-211ENST00000590239 ACO1P21399 889 aaKnown RBP16.24■□□□□ 0.19
DDX39A-211ENST00000590239 SOX5P35711 763 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 OR1G1P47890 313 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 BTG3Q14201 252 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-211ENST00000590239 SFMBT2Q5VUG0 894 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 FAM117BQ6P1L5 589 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 CD300LGQ6UXG3 332 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 DPH6Q7L8W6 267 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 TMCO2Q7Z6W1 182 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-211ENST00000590239 FAM71AQ8IYT1 594 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 TOP6BLQ8N6T0 577 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 UBR7Q8N806 425 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 C3orf58Q8NDZ4 430 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 RAD9AQ99638 391 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 ARID3AQ99856 593 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 ZBED2Q9BTP6 218 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 GPR88Q9GZN0 384 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 CWH43Q9H720 699 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 ABHD10Q9NUJ1 306 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 AIPL1Q9NZN9 384 aa16.24■□□□□ 0.19
DDX39A-211ENST00000590239 CNTN6Q9UQ52 1028 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms