RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 CERS4Q9HA82 394 aa10.95□□□□□ -0.66
APOC1-205ENST00000589781 APOBEC3GQ9HC16 384 aaKnown RBP10.95□□□□□ -0.66
APOC1-205ENST00000589781 GUCA1BQ9UMX6 200 aa10.95□□□□□ -0.66
APOC1-205ENST00000589781 PCDHA13Q9Y5I0 950 aa10.95□□□□□ -0.66
APOC1-205ENST00000589781 TRPV2Q9Y5S1 764 aa10.95□□□□□ -0.66
APOC1-205ENST00000589781 EYSQ5T1H1 3165 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 DDX3XO00571 662 aaKnown RBP eCLIP10.94□□□□□ -0.661e-7■■■■■ 82.7
APOC1-205ENST00000589781 MGEA5O60502 916 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 LPXNO60711 386 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.66
APOC1-205ENST00000589781 CALCAP01258 141 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 CLTAP09496 248 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 CD52P31358 61 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 USP8P40818 1118 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 MAGEA1P43355 309 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 MFAP3P55082 362 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 NOP14P78316 857 aaKnown RBP10.94□□□□□ -0.66
APOC1-205ENST00000589781 HTRA4P83105 476 aaPredicted RBP10.94□□□□□ -0.66
APOC1-205ENST00000589781 NCOA4Q13772 614 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 IKBKEQ14164 716 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 SLC18A3Q16572 532 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 ZNF569Q5MCW4 686 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 CCDC122Q5T0U0 273 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 JADE1Q6IE81 842 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 FAM117BQ6P1L5 589 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 FAM228AQ86W67 206 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 DNAAF5Q86Y56 855 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 SHC3Q92529 594 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 ANKRD36BP1Q96IX9 119 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 EIF2AQ9BY44 585 aaKnown RBP10.94□□□□□ -0.66
APOC1-205ENST00000589781 MTIF3Q9H2K0 278 aaKnown RBP10.94□□□□□ -0.66
APOC1-205ENST00000589781 PRDM6Q9NQX0 595 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 PIN4Q9Y237 131 aaKnown RBP10.94□□□□□ -0.66
APOC1-205ENST00000589781 MYH10P35580 1976 aa10.94□□□□□ -0.66
APOC1-205ENST00000589781 A0A1B0GUA9 196 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 MACROD2A1Z1Q3 448 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 M0QZ92 97 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 ENPP3O14638 875 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 KIF5CO60282 957 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 TNNC2P02585 160 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 KRT5P13647 590 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 EIF4BP23588 611 aaKnown RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 HOXA11P31270 313 aaPredicted RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 GRM5P41594 1212 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 GUCY2FP51841 1108 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 CRYBB1P53674 252 aaPredicted RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 AP3M2P53677 418 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 MYL6P60660 151 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 CDC42EP1Q00587 391 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 NOTUMQ6P988 496 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 SLC27A1Q6PCB7 646 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 SCARA5Q6ZMJ2 495 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 TRAPPC11Q7Z392 1133 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 KIF18AQ8NI77 898 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 TOP1MTQ969P6 601 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 SYT11Q9BT88 431 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 APOL6Q9BWW8 343 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 CELF4Q9BZC1 486 aaKnown RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 TSGA10Q9BZW7 698 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 NXF3Q9H4D5 531 aaKnown RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 RC3H2Q9HBD1 1191 aaKnown RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 SEPT11Q9NVA2 429 aaKnown RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 ADAMTS1Q9UHI8 967 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 MSRAQ9UJ68 235 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 NOC2LQ9Y3T9 749 aaKnown RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 PAXBP1Q9Y5B6 917 aa10.93□□□□□ -0.66
APOC1-205ENST00000589781 BZW2Q9Y6E2 419 aaKnown RBP10.93□□□□□ -0.66
APOC1-205ENST00000589781 LINC01553A4QN01 128 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
APOC1-205ENST00000589781 PJA2O43164 708 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 CYP26A1O43174 497 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 KRT86O43790 486 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 MOCS3O95396 460 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 ANXA13P27216 316 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 CASQ1P31415 396 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 GCNT1Q02742 428 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 TMEM132DQ14C87 1099 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 ZNF699Q32M78 642 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 UBXN11Q5T124 520 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 ZNF662Q6ZS27 426 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 APBB1IPQ7Z5R6 666 aaPredicted RBP10.92□□□□□ -0.66
APOC1-205ENST00000589781 NOP9Q86U38 636 aaKnown RBP10.92□□□□□ -0.66
APOC1-205ENST00000589781 VPS36Q86VN1 386 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 PALB2Q86YC2 1186 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 FMNL3Q8IVF7 1028 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 GLYCTKQ8IVS8 523 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 FAM71AQ8IYT1 594 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 NME8Q8N427 588 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 SEPT8Q92599 483 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 SNX27Q96L92 541 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 ACAP3Q96P50 834 aa10.92□□□□□ -0.66
APOC1-205ENST00000589781 AGPAT1Q99943 283 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms