RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 PTPRJQ12913 1337 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 GOLGA6L6A8MZA4 724 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 PIRO00625 290 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 FGFR1OPO95684 399 aaKnown RBP21.73■■□□□ 1.07
ATG4D-208ENST00000588667 DLATP10515 647 aaKnown RBP21.73■■□□□ 1.07
ATG4D-208ENST00000588667 BRCC3P46736 316 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 HYAL1Q12794 435 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 KIAA0319Q5VV43 1072 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 DRC7Q8IY82 874 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 B3GALT6Q96L58 329 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 CDCA3Q99618 268 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-208ENST00000588667 DUSP9Q99956 384 aaKnown RBP21.73■■□□□ 1.07
ATG4D-208ENST00000588667 TTPALQ9BTX7 342 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 TLE6Q9H808 572 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 ITGA11Q9UKX5 1188 aa21.73■■□□□ 1.07
ATG4D-208ENST00000588667 PPEF2O14830 753 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 NCK2O43639 380 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 LILRB3O75022 631 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 AKAP3O75969 853 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 TNNC2P02585 160 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 PAX3P23760 479 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 NRIP1P48552 1158 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 AARSP49588 968 aaKnown RBP eCLIP21.72■■□□□ 1.07
ATG4D-208ENST00000588667 DUOXA2Q1HG44 320 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 LMBRD2Q68DH5 695 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-208ENST00000588667 FAM114A1Q8IWE2 563 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 ZC3H3Q8IXZ2 948 aaKnown RBP21.72■■□□□ 1.07
ATG4D-208ENST00000588667 C1orf127Q8N9H9 656 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 SUSD3Q96L08 255 aa21.72■■□□□ 1.07
ATG4D-208ENST00000588667 SRRTQ9BXP5 876 aaKnown RBP21.72■■□□□ 1.07
ATG4D-208ENST00000588667 MAGEC2Q9UBF1 373 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-208ENST00000588667 C2CD2LO14523 706 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 CETN3O15182 167 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 TNNI1P19237 187 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 FGFR3P22607 806 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 PSMC2P35998 433 aaKnown RBP21.71■■□□□ 1.07
ATG4D-208ENST00000588667 FKBP3Q00688 224 aaKnown RBP21.71■■□□□ 1.07
ATG4D-208ENST00000588667 DUSP6Q16828 381 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 RTP2Q5QGT7 225 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 RBM23Q86U06 439 aaKnown RBP21.71■■□□□ 1.07
ATG4D-208ENST00000588667 OR5B17Q8NGF7 314 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 PARD3BQ8TEW8 1205 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 MKNK1Q9BUB5 465 aa21.71■■□□□ 1.07
ATG4D-208ENST00000588667 KCNJ18B7U540 433 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 I3L4J1 428 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 SYN3O14994 580 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 ITGB3P05106 788 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 EEF1GP26641 437 aaKnown RBP21.7■■□□□ 1.06
ATG4D-208ENST00000588667 CLDN10P78369 228 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 CREMQ03060 361 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 KCNJ12Q14500 433 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 COL19A1Q14993 1142 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 SKIV2LQ15477 1246 aaKnown RBP21.7■■□□□ 1.06
ATG4D-208ENST00000588667 TCP11X2Q5H9J9 407 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 PDXDC1Q6P996 788 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 INTS8Q75QN2 995 aaKnown RBP21.7■■□□□ 1.06
ATG4D-208ENST00000588667 USP37Q86T82 979 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 CEP57Q86XR8 500 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 FAM186BQ8IYM0 893 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 PLEKHO2Q8TD55 490 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 TMC2Q8TDI7 906 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 RIN2Q8WYP3 895 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-208ENST00000588667 PIK3R5Q8WYR1 880 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 FAM84AQ96KN4 292 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 ZNF560Q96MR9 790 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 EMILIN2Q9BXX0 1053 aa21.7■■□□□ 1.06
ATG4D-208ENST00000588667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.7■■□□□ 1.06
ATG4D-208ENST00000588667 SPTBN5Q9NRC6 3674 aaKnown RBP21.7■■□□□ 1.06
ATG4D-208ENST00000588667 POLR2BP30876 1174 aaKnown RBP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 PNPLA4P41247 253 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 LILRA4P59901 499 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 ENPEPQ07075 957 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 FILIP1LQ4L180 1135 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 LRRC52Q8N7C0 313 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 EFHBQ8N7U6 833 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 CXorf38Q8TB03 319 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 POP1Q99575 1024 aaKnown RBP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 LIMA1Q9UHB6 759 aaKnown RBP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 LRRIQ3A6PVS8 624 aaPredicted RBP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 M0QZQ0 153 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 PER2O15055 1255 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 SLC34A2O95436 690 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 CNPP09543 421 aaKnown RBP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 EPB41P11171 864 aaKnown RBP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 TKTP29401 623 aaKnown RBP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 GTF2F1P35269 517 aaKnown RBP eCLIP21.69■■□□□ 1.06
ATG4D-208ENST00000588667 TAF6P49848 677 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 AP3M2P53677 418 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 HS1BP3Q53T59 392 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 SPC24Q8NBT2 197 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 EEF2KMTQ96G04 330 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 IGFLR1Q9H665 355 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 RXFP1Q9HBX9 757 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 SIX4Q9UIU6 781 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 PCDHB8Q9UN66 801 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 TSC2P49815 1807 aa21.69■■□□□ 1.06
ATG4D-208ENST00000588667 LRRC10BA6NIK2 292 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 SLC16A3O15427 465 aaKnown RBP21.68■■□□□ 1.06
ATG4D-208ENST00000588667 KRT13P13646 458 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 RBP5P82980 135 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms