RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 CHRM2P08172 466 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 CELA2AP08217 269 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 MTHFD1P11586 935 aaKnown RBP4.41□□□□□ -1.7
VPS4B-203ENST00000588323 SLC6A4P31645 630 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 PTPRRQ15256 657 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 FAM153CQ494X1 144 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 UTP14CQ5TAP6 766 aaKnown RBP4.41□□□□□ -1.7
VPS4B-203ENST00000588323 FCRLBQ6BAA4 426 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 AFAP1L2Q8N4X5 818 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 DPF1Q92782 380 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 SLC2A13Q96QE2 648 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 CTTNBP2NLQ9P2B4 639 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 INTUQ9ULD6 942 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 ST3GAL5Q9UNP4 418 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 WASHC2AQ641Q2 1341 aa4.41□□□□□ -1.7
VPS4B-203ENST00000588323 LINC00473A8K010 186 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 ADM5C9JUS6 153 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 GRM6O15303 877 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 ELFN1P0C7U0 828 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 ANXA11P50995 505 aaKnown RBP4.4□□□□□ -1.71
VPS4B-203ENST00000588323 DYRK1AQ13627 763 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 TXNRD1Q16881 649 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 PABPC1LQ4VXU2 614 aaKnown RBP4.4□□□□□ -1.71
VPS4B-203ENST00000588323 NOP9Q86U38 636 aaKnown RBP4.4□□□□□ -1.71
VPS4B-203ENST00000588323 ADGRG5Q8IZF4 528 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 PPM1NQ8N819 430 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 DCBLD1Q8N8Z6 715 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 B3GALNT2Q8NCR0 500 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 MYCBPAPQ8TBZ2 947 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 NRG4Q8WWG1 115 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 SNX19Q92543 992 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 TMX3Q96JJ7 454 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 HAPLN3Q96S86 360 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 PACSIN1Q9BY11 444 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 TDP1Q9NUW8 608 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 SAP30BPQ9UHR5 308 aaKnown RBP4.4□□□□□ -1.71
VPS4B-203ENST00000588323 TBX22Q9Y458 520 aa4.4□□□□□ -1.71
VPS4B-203ENST00000588323 CCDC195A0A1B0GUA6 201 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 GCOM1H8Y6P7 765 aaPredicted RBP4.39□□□□□ -1.71
VPS4B-203ENST00000588323 TOR1BO14657 336 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 PPP3CBP16298 524 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 AGXTP21549 392 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 ZNF425Q6IV72 752 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 MIGA2Q7L4E1 593 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 SPATS2Q86XZ4 545 aaKnown RBP4.39□□□□□ -1.71
VPS4B-203ENST00000588323 AMOTL1Q8IY63 956 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 ZNF366Q8N895 744 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 WDR66Q8TBY9 1149 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 RAB24Q969Q5 203 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 KLHL32Q96NJ5 620 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 JKAMPQ9P055 326 aa4.39□□□□□ -1.71
VPS4B-203ENST00000588323 FNDC1Q4ZHG4 1894 aaPredicted RBP4.39□□□□□ -1.71
VPS4B-203ENST00000588323 CACNA1IQ9P0X4 2223 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 SUN1O94901 812 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 EYA4O95677 639 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 SBK3P0C264 359 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 ITPKBP27987 946 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 CTGFP29279 349 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 NXPH1P58417 271 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 MC2RQ01718 297 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 ITIH3Q06033 890 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 PIGFQ07326 219 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 SLC10A2Q12908 348 aaPredicted RBP4.38□□□□□ -1.71
VPS4B-203ENST00000588323 LLGL1Q15334 1064 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 LHFPL2Q6ZUX7 228 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 RASAL3Q86YV0 1011 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 NSUN7Q8NE18 718 aaKnown RBP4.38□□□□□ -1.71
VPS4B-203ENST00000588323 IL17RDQ8NFM7 739 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 ZNF277Q9NRM2 450 aaPredicted RBP4.38□□□□□ -1.71
VPS4B-203ENST00000588323 VSX1Q9NZR4 365 aaPredicted RBP4.38□□□□□ -1.71
VPS4B-203ENST00000588323 PADI4Q9UM07 663 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 AOX1Q06278 1338 aa4.38□□□□□ -1.71
VPS4B-203ENST00000588323 GPR39O43194 453 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 URI1O94763 535 aaPredicted RBP4.37□□□□□ -1.71
VPS4B-203ENST00000588323 CNGA1P29973 690 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 WASP42768 502 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 MASP1P48740 699 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 KRTAP10-9P60411 292 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 ERVK-21P61565 698 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 CDC42EP1Q00587 391 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 TARDBPQ13148 414 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS4B-203ENST00000588323 GRM1Q13255 1194 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 HLXQ14774 488 aaPredicted RBP4.37□□□□□ -1.71
VPS4B-203ENST00000588323 CLUL1Q15846 466 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 ZNF365Q70YC5 407 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 CFAP52Q8N1V2 620 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 AOPEPQ8N6M6 819 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
VPS4B-203ENST00000588323 C9orf106Q8NAJ2 232 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 PDPRQ8NCN5 879 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 SLC17A8Q8NDX2 589 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 IFI44Q8TCB0 444 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 COG1Q8WTW3 980 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 SSH1Q8WYL5 1049 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 IMPG2Q9BZV3 1241 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 KLC4Q9NSK0 619 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 FLRT1Q9NZU1 646 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 ADAM21Q9UKJ8 722 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms