RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 B3GALT6Q96L58 329 aa12.8□□□□□ -0.36
SDHDP1-201ENST00000588055 METTL14Q9HCE5 456 aaKnown RBP12.8□□□□□ -0.36
SDHDP1-201ENST00000588055 CHST7Q9NS84 486 aa12.8□□□□□ -0.36
SDHDP1-201ENST00000588055 ARMCX3Q9UH62 379 aaPredicted RBP12.8□□□□□ -0.36
SDHDP1-201ENST00000588055 COG5Q9UP83 839 aa12.8□□□□□ -0.36
SDHDP1-201ENST00000588055 KPNA7A9QM74 516 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 PIRO00625 290 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 IKBKBO14920 756 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 HUS1O60921 280 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 EFEMP2O95967 443 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 GLUD1P00367 558 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 PMS1P54277 932 aaKnown RBP12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 STX17P56962 302 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 TNNC1P63316 161 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 STX1AQ16623 288 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 AAK1Q2M2I8 961 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 KIAA0319Q5VV43 1072 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 TTI2Q6NXR4 508 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 PRSS55Q6UWB4 352 aaPredicted RBP12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 EFHBQ8N7U6 833 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 HLA-CQ95604 372 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 POP1Q99575 1024 aaKnown RBP12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 THEGQ9P2T0 379 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 PTPRJQ12913 1337 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 COL6A3P12111 3177 aa12.79□□□□□ -0.36
SDHDP1-201ENST00000588055 M0QZQ0 153 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 PPEF2O14830 753 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 PER2O15055 1255 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 TEX28O15482 410 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 CNPP09543 421 aaKnown RBP12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 TRIM49P0CI25 452 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 TRIM49CP0CI26 452 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 P4HA1P13674 534 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 TYMPP19971 482 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 MXI1P50539 228 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 ZNF699Q32M78 642 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 CTXN3Q4LDR2 81 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 CT47A1Q5JQC4 288 aaPredicted RBP12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 LLGL2Q6P1M3 1020 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 RBM43Q6ZSC3 357 aaKnown RBP12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 GLYCTKQ8IVS8 523 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 FAM114A1Q8IWE2 563 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 ZC3H3Q8IXZ2 948 aaKnown RBP12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 UBE2ZQ9H832 354 aaPredicted RBP12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 DZANK1Q9NVP4 752 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 MTRRQ9UBK8 725 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 TSC2P49815 1807 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
SDHDP1-201ENST00000588055 CYB561D2O14569 222 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 CLASP2O75122 1294 aaKnown RBP12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 CPB1P15086 417 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 ERCC5P28715 1186 aaPredicted RBP12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 ATICP31939 592 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 GTF2H1P32780 548 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 CLDN10P78369 228 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 CETN1Q12798 172 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 NCOA4Q13772 614 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 TDRD10Q5VZ19 366 aaKnown RBP12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 CD300LGQ6UXG3 332 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 THEM5Q8N1Q8 247 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 RXFP1Q9HBX9 757 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 TMEM8AQ9HCN3 771 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 MAGEC2Q9UBF1 373 aaPredicted RBP12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 SIX4Q9UIU6 781 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 SNX9Q9Y5X1 595 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 BACE2Q9Y5Z0 518 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 CDY1Q9Y6F8 540 aa12.77□□□□□ -0.37
SDHDP1-201ENST00000588055 SCN1AP35498 2009 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 REV3LO60673 3130 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms