RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PGRMC1O00264 195 aaKnown RBP23.78■■□□□ 1.4
CIRBP-208ENST00000586548 TREHO43280 583 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 SEC31AO94979 1220 aaKnown RBP23.78■■□□□ 1.4
CIRBP-208ENST00000586548 NPTXRO95502 500 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 CD58P19256 250 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 AXLP30530 894 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 GJA9P57773 515 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 GLE1Q53GS7 698 aaKnown RBP23.78■■□□□ 1.4
CIRBP-208ENST00000586548 MON1BQ7L1V2 547 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 ZNF606Q8WXB4 792 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 CPA5Q8WXQ8 436 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 TRIB2Q92519 343 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.78■■□□□ 1.46e-8■■□□□ 11.6
CIRBP-208ENST00000586548 TMEM59LQ9UK28 342 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 GABRQQ9UN88 632 aa23.78■■□□□ 1.4
CIRBP-208ENST00000586548 ITGB3P05106 788 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 EIF4BP23588 611 aaKnown RBP23.77■■□□□ 1.4
CIRBP-208ENST00000586548 NOGQ13253 232 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 SCARA5Q6ZMJ2 495 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 C7orf31Q8N865 590 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 VCPIP1Q96JH7 1222 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 CARD9Q9H257 536 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 PLEKHA5Q9HAU0 1116 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 ITGA11Q9UKX5 1188 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 TTC7AQ9ULT0 858 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-208ENST00000586548 CASP8AP2Q9UKL3 1982 aa23.77■■□□□ 1.4
CIRBP-208ENST00000586548 WEE2P0C1S8 567 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 C6orf222P0C671 652 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 FLT3LGP49771 235 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 PHF13Q86YI8 300 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 NME8Q8N427 588 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 MTG1Q9BT17 334 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 LRRC1Q9BTT6 524 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 UPF3AQ9H1J1 476 aaKnown RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 NXF1Q9UBU9 619 aaKnown RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 CHORDC1Q9UHD1 332 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 POLIQ9UNA4 740 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 DERAQ9Y315 318 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 NOC2LQ9Y3T9 749 aaKnown RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 CFHP08603 1231 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 TNNC1P63316 161 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 ZNF200P98182 395 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-208ENST00000586548 MESDQ14696 234 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 SNX17Q15036 470 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 LONRF2Q1L5Z9 754 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 LIN9Q5TKA1 542 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 C8orf74Q6P047 294 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 WNT8AQ9H1J5 351 aa23.76■■□□□ 1.39
CIRBP-208ENST00000586548 MYADML2A6NDP7 307 aa23.75■■□□□ 1.39
CIRBP-208ENST00000586548 TMEM110-MUSTN1A8MSY1 372 aa23.75■■□□□ 1.39
CIRBP-208ENST00000586548 LSM8O95777 96 aaKnown RBP23.75■■□□□ 1.39
CIRBP-208ENST00000586548 STAU1O95793 577 aaKnown RBP23.75■■□□□ 1.39
CIRBP-208ENST00000586548 COMTP21964 271 aa23.75■■□□□ 1.39
CIRBP-208ENST00000586548 WDR72Q3MJ13 1102 aa23.75■■□□□ 1.39
CIRBP-208ENST00000586548 BEND6Q5SZJ8 279 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-208ENST00000586548 PASD1Q8IV76 773 aa23.75■■□□□ 1.39
CIRBP-208ENST00000586548 UBL4BQ8N7F7 174 aa23.75■■□□□ 1.39
CIRBP-208ENST00000586548 SCN10AQ9Y5Y9 1956 aa23.74■■□□□ 1.39
CIRBP-208ENST00000586548 P4HA1P13674 534 aa23.74■■□□□ 1.39
CIRBP-208ENST00000586548 RNASE9P60153 205 aaKnown RBP23.74■■□□□ 1.39
CIRBP-208ENST00000586548 NKX3-2P78367 333 aa23.74■■□□□ 1.39
CIRBP-208ENST00000586548 C1QBPQ07021 282 aaKnown RBP23.74■■□□□ 1.39
CIRBP-208ENST00000586548 ZSWIM1Q9BR11 485 aa23.74■■□□□ 1.39
CIRBP-208ENST00000586548 CYP3A43Q9HB55 503 aa23.74■■□□□ 1.39
CIRBP-208ENST00000586548 SPC25Q9HBM1 224 aa23.74■■□□□ 1.39
CIRBP-208ENST00000586548 DPP3Q9NY33 737 aa23.74■■□□□ 1.39
CIRBP-208ENST00000586548 RRM1P23921 792 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 POLR2BP30876 1174 aaKnown RBP23.73■■□□□ 1.39
CIRBP-208ENST00000586548 CRYBB1P53674 252 aaPredicted RBP23.73■■□□□ 1.39
CIRBP-208ENST00000586548 RBP5P82980 135 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 PRKCZQ05513 592 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 CLUL1Q15846 466 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 GNASQ5JWF2 1037 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 DCAF12L1Q5VU92 463 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 TAF2Q6P1X5 1199 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 CD101Q93033 1021 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 KIF12Q96FN5 646 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 SNX27Q96L92 541 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 EIF2AQ9BY44 585 aaKnown RBP23.73■■□□□ 1.39
CIRBP-208ENST00000586548 FAM124BQ9H5Z6 455 aaPredicted RBP23.73■■□□□ 1.39
CIRBP-208ENST00000586548 OGFRQ9NZT2 677 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 ADAM22Q9P0K1 906 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 PCDHGC3Q9UN70 934 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 CCDC188H7C350 402 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 SEPT4O43236 478 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 BRD2P25440 801 aaKnown RBP23.73■■□□□ 1.39
CIRBP-208ENST00000586548 CTNNA2P26232 953 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 YARSP54577 528 aaKnown RBP23.73■■□□□ 1.39
CIRBP-208ENST00000586548 MAP9Q49MG5 647 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 REM2Q8IYK8 340 aaPredicted RBP23.73■■□□□ 1.39
CIRBP-208ENST00000586548 HPDLQ96IR7 371 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 ZNF518BQ9C0D4 1074 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 SNTG2Q9NY99 539 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 FAM53CQ9NYF3 392 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 AGAP1Q9UPQ3 857 aa23.73■■□□□ 1.39
CIRBP-208ENST00000586548 PAEPP09466 180 aa23.72■■□□□ 1.39
CIRBP-208ENST00000586548 PTP4A2Q12974 167 aa23.72■■□□□ 1.39
CIRBP-208ENST00000586548 ZNF394Q53GI3 561 aa23.72■■□□□ 1.39
CIRBP-208ENST00000586548 TMEM40Q8WWA1 233 aa23.72■■□□□ 1.39
CIRBP-208ENST00000586548 ALG3Q92685 438 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms