RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 COQ4Q9Y3A0 265 aa14.65□□□□□ -0.06
VMP1-203ENST00000586245 TMEM265A0A087WTH1 108 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 GTPBP10A4D1E9 387 aaKnown RBP14.64□□□□□ -0.07
VMP1-203ENST00000586245 LGALS16A8MUM7 142 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 ITGB1P05556 798 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 P4HA1P13674 534 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 BRCC3P46736 316 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 TNNC1P63316 161 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 ZNF667Q5HYK9 610 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 SCARA3Q6AZY7 606 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 SUSD3Q96L08 255 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 SENP8Q96LD8 212 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 VRTNQ9H8Y1 702 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 GCNT4Q9P109 453 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 KIAA1671Q9BY89 1806 aa14.64□□□□□ -0.07
VMP1-203ENST00000586245 CYB561D2O14569 222 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 SPTLC1O15269 473 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 HUS1O60921 280 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 ASS1P00966 412 aaKnown RBP14.63□□□□□ -0.07
VMP1-203ENST00000586245 ODC1P11926 461 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 AARSP49588 968 aaKnown RBP eCLIP14.63□□□□□ -0.07
VMP1-203ENST00000586245 UBASH3AP57075 661 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 NOP14P78316 857 aaKnown RBP14.63□□□□□ -0.07
VMP1-203ENST00000586245 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 UBXN1Q04323 297 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 UBE3AQ05086 875 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 GPM6BQ13491 265 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 BMS1Q14692 1282 aaKnown RBP14.63□□□□□ -0.07
VMP1-203ENST00000586245 EXOC3L4Q17RC7 722 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 WDR72Q3MJ13 1102 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 TIGD5Q53EQ6 642 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 CD300LGQ6UXG3 332 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 APTXQ7Z2E3 356 aaKnown RBP14.63□□□□□ -0.07
VMP1-203ENST00000586245 DDX53Q86TM3 631 aaKnown RBP14.63□□□□□ -0.07
VMP1-203ENST00000586245 EHBP1Q8NDI1 1231 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 SEMA4DQ92854 862 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 MMS19Q96T76 1030 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 CRACR2AQ9BSW2 395 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 PI4K2AQ9BTU6 479 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 GPR62Q9BZJ7 368 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 INTS2Q9H0H0 1204 aaKnown RBP14.63□□□□□ -0.07
VMP1-203ENST00000586245 XYLT2Q9H1B5 865 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 ZNF576Q9H609 170 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.63□□□□□ -0.07
VMP1-203ENST00000586245 GDAP2Q9NXN4 497 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 NXF1Q9UBU9 619 aaKnown RBP14.63□□□□□ -0.07
VMP1-203ENST00000586245 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 LZTS1Q9Y250 596 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 SNX9Q9Y5X1 595 aa14.63□□□□□ -0.07
VMP1-203ENST00000586245 H3BNC9 293 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 I3L4J1 428 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 M0QZQ0 153 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 SOD2P04179 222 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 TPM3P06753 285 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 IGFBP6P24592 240 aaPredicted RBP14.62□□□□□ -0.07
VMP1-203ENST00000586245 USP41Q3LFD5 358 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 FAM171A1Q5VUB5 890 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 KIAA1841Q6NSI8 718 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.62□□□□□ -0.07
VMP1-203ENST00000586245 NLRC5Q86WI3 1866 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 METTL23Q86XA0 190 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 CEP57Q86XR8 500 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 VPS52Q8N1B4 723 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 APPL2Q8NEU8 664 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 POF1BQ8WVV4 589 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 NT5C1BQ96P26 610 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 HERC2P3Q9BVR0 1158 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 NIF3L1Q9GZT8 377 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 ALG13Q9NP73 1137 aaKnown RBP14.62□□□□□ -0.07
VMP1-203ENST00000586245 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
VMP1-203ENST00000586245 DSEQ9UL01 958 aa14.62□□□□□ -0.07
VMP1-203ENST00000586245 A0A1B0GTH6 734 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 SYN3O14994 580 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 CBFA2T2O43439 604 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 LRMPQ12912 555 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 UVSSAQ2YD98 709 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 SPOPLQ6IQ16 392 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 SCARA5Q6ZMJ2 495 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 DPH6Q7L8W6 267 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 TOP6BLQ8N6T0 577 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 SPPL3Q8TCT6 385 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 ELMO3Q96BJ8 720 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 FAXDC2Q96IV6 333 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 PCMTD1Q96MG8 357 aaPredicted RBP14.61□□□□□ -0.07
VMP1-203ENST00000586245 TTPALQ9BTX7 342 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 APOBEC3GQ9HC16 384 aaKnown RBP14.61□□□□□ -0.07
VMP1-203ENST00000586245 IFNKQ9P0W0 207 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 SSX2IPQ9Y2D8 614 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 LAMA3Q16787 3333 aa14.61□□□□□ -0.07
VMP1-203ENST00000586245 LAMA2P24043 3122 aaKnown RBP14.6□□□□□ -0.07
VMP1-203ENST00000586245 SOX1O00570 391 aaPredicted RBP14.6□□□□□ -0.07
VMP1-203ENST00000586245 GRM6O15303 877 aa14.6□□□□□ -0.07
VMP1-203ENST00000586245 LRRN2O75325 713 aa14.6□□□□□ -0.07
VMP1-203ENST00000586245 URODP06132 367 aa14.6□□□□□ -0.07
VMP1-203ENST00000586245 SLC9A1P19634 815 aa14.6□□□□□ -0.07
VMP1-203ENST00000586245 TYMPP19971 482 aa14.6□□□□□ -0.07
VMP1-203ENST00000586245 FGFR3P22607 806 aa14.6□□□□□ -0.07
VMP1-203ENST00000586245 PON1P27169 355 aa14.6□□□□□ -0.07
VMP1-203ENST00000586245 TKTP29401 623 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms