RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 COLGALT2Q8IYK4 626 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 ZNF516Q92618 1163 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 CLP1Q92989 425 aaKnown RBP13.61□□□□□ -0.23
VMP1-202ENST00000585847 C18orf25Q96B23 403 aaPredicted RBP13.61□□□□□ -0.23
VMP1-202ENST00000585847 CGRRF1Q99675 332 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 ZBED2Q9BTP6 218 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 NKX2-4Q9H2Z4 354 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 ASB7Q9H672 318 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 LUC7LQ9NQ29 371 aaKnown RBP13.61□□□□□ -0.23
VMP1-202ENST00000585847 DNAJB4Q9UDY4 337 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 DERAQ9Y315 318 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
VMP1-202ENST00000585847 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 KIF2AO00139 706 aaPredicted RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 ZNF500O60304 480 aaPredicted RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 GFPT2O94808 682 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 CA3P07451 260 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 DLG4P78352 724 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 MRPS5P82675 430 aaKnown RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 CCZ1BP86790 482 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 CCZ1P86791 482 aaPredicted RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 TAP1Q03518 808 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 GRIK3Q13003 919 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 BTG3Q14201 252 aaPredicted RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 TRIM65Q6PJ69 517 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 FBXL13Q8NEE6 735 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 OR5B17Q8NGF7 314 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 CXorf38Q8TB03 319 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 RSPH1Q8WYR4 309 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 TAF4BQ92750 862 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 ASB2Q96Q27 587 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 PAAF1Q9BRP4 392 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 IMPG2Q9BZV3 1241 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 TOPORSQ9NS56 1045 aaPredicted RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 FAM207AQ9NSI2 230 aaPredicted RBP13.6□□□□□ -0.23
VMP1-202ENST00000585847 APEX2Q9UBZ4 518 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 TUBGCP4Q9UGJ1 667 aa13.6□□□□□ -0.23
VMP1-202ENST00000585847 SSU72P8A0A1W2PR75 194 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
VMP1-202ENST00000585847 F8W810 466 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 THP07101 528 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 GALTP07902 379 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 UCHL3P15374 230 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 CYLC1P35663 651 aaPredicted RBP13.59□□□□□ -0.23
VMP1-202ENST00000585847 PBX3P40426 434 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 SLC11A1P49279 550 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 EPC2Q52LR7 807 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 KLHDC7AQ5VTJ3 777 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 TMEM173Q86WV6 379 aaPredicted RBP13.59□□□□□ -0.23
VMP1-202ENST00000585847 ABI1Q8IZP0 508 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 LRRC43Q8N309 656 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 FIBCD1Q8N539 461 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 URGCPQ8TCY9 931 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 ADAMTS19Q8TE59 1207 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 BCL7CQ8WUZ0 217 aaPredicted RBP13.59□□□□□ -0.23
VMP1-202ENST00000585847 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 SPAG5Q96R06 1193 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
VMP1-202ENST00000585847 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
VMP1-202ENST00000585847 MRPL9Q9BYD2 267 aaKnown RBP13.59□□□□□ -0.23
VMP1-202ENST00000585847 STK33Q9BYT3 514 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 MARCH5Q9NX47 278 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 C2CD2Q9Y426 696 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 ATP8B3O60423 1300 aa13.59□□□□□ -0.23
VMP1-202ENST00000585847 VWA8A3KMH1 1905 aa13.58□□□□□ -0.23
VMP1-202ENST00000585847 EPOPA6NHQ4 379 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 PPEF2O14830 753 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
VMP1-202ENST00000585847 EFEMP2O95967 443 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 PON1P27169 355 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 BCAR1P56945 870 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 ERVK-21P61565 698 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 KRT83P78385 493 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 GCNT1Q02742 428 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 TUSC3Q13454 348 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 DUOXA2Q1HG44 320 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 ZACNQ401N2 412 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 C15orf39Q6ZRI6 1047 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 VPS36Q86VN1 386 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 TTC39CQ8N584 583 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 COLGALT1Q8NBJ5 622 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 EHBP1Q8NDI1 1231 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 INTS2Q9H0H0 1204 aaKnown RBP13.58□□□□□ -0.24
VMP1-202ENST00000585847 GANQ9H2C0 597 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 KCNF1Q9H3M0 494 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 AIPL1Q9NZN9 384 aa13.58□□□□□ -0.24
VMP1-202ENST00000585847 CHD9Q3L8U1 2897 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 ANO9A1A5B4 782 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms