RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 C9orf72Q96LT7 481 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 RIT2Q99578 217 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 JPH1Q9HDC5 661 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 CDYLQ9Y232 598 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 SNTNA6NMZ2 147 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 GRK2P25098 689 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 PSMA4P25789 261 aaKnown RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 STK4Q13043 487 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 KRT33BQ14525 404 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 C12orf60Q5U649 245 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 IGDCC4Q8TDY8 1250 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 PIGBQ92521 554 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 PTPRN2Q92932 1015 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ASIC4Q96FT7 647 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 POLE3Q9NRF9 147 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 IRAK4Q9NWZ3 460 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 PCDHB8Q9UN66 801 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 USP17L10C9JJH3 530 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 IGF2BP3O00425 579 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDH8-214ENST00000585315 MAP3K13O43283 966 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 HIST1H2AGP0C0S8 130 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 FCGR1AP12314 374 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 HIST1H2ADP20671 130 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CARSP49589 748 aaKnown RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 HABP4Q5JVS0 413 aaKnown RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 SYCP2LQ5T4T6 812 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 C1orf228Q6PIY5 440 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CATSPER3Q86XQ3 398 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 RDM1Q8NG50 284 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 RNF217Q8TC41 542 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 HIST1H2AHQ96KK5 128 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 NR1H4Q96RI1 486 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 HIST1H2AJQ99878 128 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 H2AFJQ9BTM1 129 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ILKAPQ9H0C8 392 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 ACAD9Q9H845 621 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 AGPAT5Q9NUQ2 364 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CDC42BPBQ9Y5S2 1711 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CLRN2A0PK11 232 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ENO4A6NNW6 628 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 KCNN4O15554 427 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 GAS2O43903 313 aaKnown RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 ZC3H11AO75152 810 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDH8-214ENST00000585315 RPS6KA4O75676 772 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ALBP02768 609 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 PDGFRAP16234 1089 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ALDH18A1P54886 795 aaKnown RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 MCL1Q07820 350 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 SNRNP35Q16560 246 aaKnown RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 DEPDC1Q5TB30 811 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ACTRT1Q8TDG2 376 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 MASTLQ96GX5 879 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 EPC1Q9H2F5 836 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 RNF146Q9NTX7 359 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CCDC195A0A1B0GUA6 201 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 MAGEB2O15479 319 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 PYGMP11217 842 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CALB2P22676 271 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 HMOX2P30519 316 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 HSD17B3P37058 310 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 TPI1P60174 286 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 FMR1Q06787 632 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDH8-214ENST00000585315 NAPEPLDQ6IQ20 393 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 EFCAB1Q9HAE3 211 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 MAGED2Q9UNF1 606 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 IGSF9BQ9UPX0 1349 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 NCOA3Q9Y6Q9 1424 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 LRRC7Q96NW7 1537 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 EVPLLA8MZ36 301 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ADGRF4Q8IZF3 695 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 SH3RF3Q8TEJ3 882 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 GOLPH3Q9H4A6 298 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ROBO2Q9HCK4 1378 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 HSPBP1Q9NZL4 362 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 GABBR1Q9UBS5 961 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 BCS1LQ9Y276 419 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 LRCH1Q9Y2L9 728 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 HECW2Q9P2P5 1572 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 IL18RAPO95256 599 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 ENO3P13929 434 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDH8-214ENST00000585315 FAM83EQ2M2I3 478 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 TRIM16LQ309B1 348 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CAVIN3Q969G5 261 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 POLR3FQ9H1D9 316 aaPredicted RBP7.67□□□□□ -1.18
CDH8-214ENST00000585315 SMARCAL1Q9NZC9 954 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 SLC24A2Q9UI40 661 aa7.67□□□□□ -1.18
CDH8-214ENST00000585315 CYP26A1O43174 497 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 TIMM44O43615 452 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 TDP2O95551 362 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 HADHAP40939 763 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 SUSD4Q5VX71 490 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 DPF2Q92785 391 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 MAGEB18Q96M61 343 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 STMN3Q9NZ72 180 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 XPO7Q9UIA9 1087 aaKnown RBP7.66□□□□□ -1.18
CDH8-214ENST00000585315 NRKQ7Z2Y5 1582 aa7.66□□□□□ -1.18
CDH8-214ENST00000585315 A0A0A6YYK5 440 aaPredicted RBP7.66□□□□□ -1.18
CDH8-214ENST00000585315 CLASP2O75122 1294 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms