RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 RAD51AP2Q09MP3 1159 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 PLD1Q13393 1074 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 ZRSR1Q15695 479 aaKnown RBP16.34■□□□□ 0.21
VAPA-209ENST00000585042 ARSHQ5FYA8 562 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 GPR161Q8N6U8 529 aaKnown RBP16.34■□□□□ 0.21
VAPA-209ENST00000585042 ZBTB44Q8NCP5 570 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 DEPDC1BQ8WUY9 529 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 TCEAL4Q96EI5 215 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 UPF2Q9HAU5 1272 aaKnown RBP16.34■□□□□ 0.21
VAPA-209ENST00000585042 HEBP1Q9NRV9 189 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 ZSCAN32Q9NX65 697 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 CEP72Q9P209 647 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.21
VAPA-209ENST00000585042 OR6C75A6NL08 312 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 H3BQV1 296 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 OGTO15294 1046 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 BMP15O95972 392 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 CXCL8P10145 99 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 CPB1P15086 417 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 CD72P21854 359 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 TARSP26639 723 aaKnown RBP16.33■□□□□ 0.2
VAPA-209ENST00000585042 CCR2P41597 374 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 MATR3P43243 847 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■■■■□ 22.8
VAPA-209ENST00000585042 CSTF1Q05048 431 aaKnown RBP16.33■□□□□ 0.2
VAPA-209ENST00000585042 PPP2R3AQ06190 1150 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 TWF1Q12792 350 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 FZD5Q13467 585 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 C8orf34Q49A92 452 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 SEZ6Q53EL9 994 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 RNF19BQ6ZMZ0 732 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 USP37Q86T82 979 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 MAP4K3Q8IVH8 894 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 KIF12Q96FN5 646 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 BICD1Q96G01 975 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 CALML4Q96GE6 196 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 HAPLN2Q9GZV7 340 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 ASAH2Q9NR71 780 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 HSFX1Q9UBD0 423 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 TUBGCP4Q9UGJ1 667 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 TBX20Q9UMR3 447 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
VAPA-209ENST00000585042 SHISA7A6NL88 538 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 MOSPD3O75425 235 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 TYMPP19971 482 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 UBA7P41226 1012 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 MCM2P49736 904 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 LIG4P49917 911 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 ZNF131P52739 623 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 NRLP54845 237 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 POU5F1Q01860 360 aaKnown RBP16.32■□□□□ 0.2
VAPA-209ENST00000585042 GPR17Q13304 367 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 MYBPC2Q14324 1141 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 C1orf228Q6PIY5 440 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 MFSD6LQ8IWD5 586 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 ZNF687Q8N1G0 1237 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
VAPA-209ENST00000585042 ZNF334Q9HCZ1 680 aaPredicted RBP16.32■□□□□ 0.2
VAPA-209ENST00000585042 DCHS1Q96JQ0 3298 aa16.32■□□□□ 0.2
VAPA-209ENST00000585042 OTOGLQ3ZCN5 2332 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 FRYLO94915 3013 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 A0A0B4J269 797 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 LACTBL1A8MY62 500 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 HNRNPDLO14979 420 aaKnown RBP16.31■□□□□ 0.2
VAPA-209ENST00000585042 FAM189A1O60320 539 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 LILRB5O75023 590 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 FGF19O95750 216 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 GJB2P29033 226 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 EPHB3P54753 998 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 PUM1Q14671 1186 aaKnown RBP eCLIP16.31■□□□□ 0.22e-9■□□□□ 10.8
VAPA-209ENST00000585042 PPP2R5DQ14738 602 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 SPATA1Q5VX52 437 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 DSTYKQ6XUX3 929 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 KIAA2013Q8IYS2 634 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 HS6ST3Q8IZP7 471 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 SECISBP2LQ93073 1101 aaKnown RBP16.31■□□□□ 0.2
VAPA-209ENST00000585042 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 ZSWIM3Q96MP5 696 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 PLIN2Q99541 437 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 PARVGQ9HBI0 331 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 PRMT8Q9NR22 394 aaPredicted RBP16.31■□□□□ 0.2
VAPA-209ENST00000585042 DERAQ9Y315 318 aa16.31■□□□□ 0.2
VAPA-209ENST00000585042 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 ZNF263O14978 683 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 TRAK2O60296 914 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 MYL4P12829 197 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 SDHBP21912 280 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 LONP1P36776 959 aaKnown RBP16.3■□□□□ 0.2
VAPA-209ENST00000585042 ALDH1A3P47895 512 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 LILRA4P59901 499 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 ENOX2Q16206 610 aaKnown RBP16.3■□□□□ 0.2
VAPA-209ENST00000585042 OVOS1Q6IE37 1185 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 VITQ6UXI7 678 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 GPBP1Q86WP2 473 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 MYCT1Q8N699 235 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 ZSCAN18Q8TBC5 510 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms