RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 ASAP2O43150 1006 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 SART1O43290 800 aaKnown RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 GAS2O43903 313 aaKnown RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 HIP1RO75146 1068 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 CSDE1O75534 798 aaKnown RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 EDN1P05305 212 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 RPLP2P05387 115 aaKnown RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 ACRP10323 421 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 JUNBP17275 347 aaPredicted RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 LIG1P18858 919 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 TMOD1P28289 359 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 CASP1P29466 404 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 CDC25BP30305 580 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 BMP8BP34820 402 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 RFC2P35250 354 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 ZNF131P52739 623 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 CRYBB1P53674 252 aaPredicted RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 PTENP60484 403 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 CAPSQ13938 189 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 KIZQ2M2Z5 673 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 ZNF394Q53GI3 561 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 RASIP1Q5U651 963 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 CDCA2Q69YH5 1023 aaPredicted RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 NXPE4Q6UWF7 544 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 CCDC73Q6ZRK6 1079 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 HS2ST1Q7LGA3 356 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 FAM228AQ86W67 206 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 RHPN2Q8IUC4 686 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 TMEM199Q8N511 208 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 FSIP1Q8NA03 581 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 MCPH1Q8NEM0 835 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 DBF4BQ8NFT6 615 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 TCP11Q8WWU5 503 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 LINC01599Q8WXQ3 324 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 SLC7A3Q8WY07 619 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 STAMQ92783 540 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 KCNN1Q92952 543 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 DHX58Q96C10 678 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 OSMRQ99650 979 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 C7orf25Q9BPX7 421 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 JPH2Q9BR39 696 aaPredicted RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.22□□□□□ -1.41
CDH8-213ENST00000584966 REEP2Q9BRK0 252 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 FDXACB1Q9BRP7 624 aaPredicted RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 NFKBIZQ9BYH8 718 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 BCO2Q9BYV7 579 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 POLR3FQ9H1D9 316 aaPredicted RBP6.22□□□□□ -1.41
CDH8-213ENST00000584966 ERVK-5Q9HDB9 667 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 IL23AQ9NPF7 189 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 LMBRD1Q9NUN5 540 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 KCND2Q9NZV8 630 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 AKT3Q9Y243 479 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 PCDHGB7Q9Y5F8 929 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 COL4A3BPQ9Y5P4 624 aa6.22□□□□□ -1.41
CDH8-213ENST00000584966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 ENPP3O14638 875 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 KLRC4O43908 158 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 MGEA5O60502 916 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 ZNF202O95125 648 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 PARNO95453 639 aaKnown RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 SLFN14P0C7P3 912 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 SRGAP2CP0DJJ0 459 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 GHRP10912 638 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 DARSP14868 501 aaKnown RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 FGFR4P22455 802 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 HOXA11P31270 313 aaPredicted RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 CD52P31358 61 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 STAT6P42226 847 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 DNM2P50570 870 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 CDC42EP1Q00587 391 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 FPGSQ05932 587 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 MBTD1Q05BQ5 628 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 CUL4BQ13620 913 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 GRM2Q14416 872 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 DHX8Q14562 1220 aaKnown RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 MXD4Q14582 209 aaPredicted RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 SHHQ15465 462 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 MSMPQ1L6U9 139 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 C9orf50Q5SZB4 431 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 FAM102BQ5T8I3 360 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 KIAA0319Q5VV43 1072 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 TSHZ1Q6ZSZ6 1077 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 ZNF365Q70YC5 407 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 SV2BQ7L1I2 683 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 ERMP1Q7Z2K6 904 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 DEFB128Q7Z7B8 93 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 RSPH3Q86UC2 560 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 ZNF410Q86VK4 478 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 GPBP1Q86WP2 473 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 GRAMD1CQ8IYS0 662 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 IQUBQ8NA54 791 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 PSPC1Q8WXF1 523 aaKnown RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 MRPS27Q92552 414 aaKnown RBP6.21□□□□□ -1.42
CDH8-213ENST00000584966 PMEPA1Q969W9 287 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 PAGE5Q96GU1 130 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 CDK5RAP3Q96JB5 506 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms