RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 JUNP05412 331 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 CD53P19397 219 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 MGAT1P26572 445 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 IARSP41252 1262 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 GRIA2P42262 883 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 ID4P47928 161 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 GLRBP48167 497 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 KIF23Q02241 960 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 KIAA0753Q2KHM9 967 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 PARP10Q53GL7 1025 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 KCNT2Q6UVM3 1135 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 RNF207Q6ZRF8 634 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC16A11Q8NCK7 471 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 FRS2Q8WU20 508 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TGFBRAP1Q8WUH2 860 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 RABGGTAQ92696 567 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 NEIL1Q96FI4 390 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 UIMC1Q96RL1 719 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 BOCQ9BWV1 1114 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 CDH19Q9H159 772 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 WNT8AQ9H1J5 351 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 PRDM16Q9HAZ2 1276 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 OBP2AQ9NY56 170 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 ZFP69BQ9UJL9 534 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 HS3ST3A1Q9Y663 406 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 DDX60Q8IY21 1712 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF609O15014 1411 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 KAT6BQ8WYB5 2073 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TCRBV16S1A1N1A0A5B0 115 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 ERVV-1B6SEH8 477 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 FOXP2O15409 715 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 DLX3O60479 287 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 CDC14BO60729 498 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TCEA3O75764 348 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 MYBP10242 640 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 HIBADHP31937 336 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 LSSP48449 732 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 EFR3AQ14156 821 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TMEM132BQ14DG7 1078 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TAF12Q16514 161 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 LONRF1Q17RB8 773 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 FAM43BQ6ZT52 329 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 MRGPRGQ86SM5 289 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TEX19Q8NA77 164 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TMEM145Q8NBT3 493 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 GLB1L3Q8NCI6 653 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 CHTF18Q8WVB6 975 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 MIEF2Q96C03 454 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 DCLRE1CQ96SD1 692 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 CDC5LQ99459 802 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 EPB41L4AQ9HCS5 686 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 C1orf112Q9NSG2 853 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 JAG2Q9Y219 1238 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 SIPA1L3O60292 1781 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 CDHR2Q9BYE9 1310 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 A0A0U1RQG5 324 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 LTFP02788 710 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 GNAT2P19087 354 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 FNTBP49356 437 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 KIF11P52732 1056 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 ELLP55199 621 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 ERVK-21P61565 698 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 IRF9Q00978 393 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 KLF1Q13351 362 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 PRSS53Q2L4Q9 553 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 METTL24Q5JXM2 366 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 GPR158Q5T848 1215 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 ANKRD45Q5TZF3 282 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 AOPEPQ8N6M6 819 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 SHCBP1Q8NEM2 672 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 TAF1DQ9H5J8 278 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 INCENPQ9NQS7 918 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 EBF1Q9UH73 591 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 CARMIL3Q8ND23 1372 aa2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 A0A1W2PRX2 142 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MATN3O15232 486 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 RFPL1O75677 317 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 PRKD3O94806 890 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 BPIP17213 487 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 AK2P54819 239 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 WNT3AP56704 352 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 MOGSQ13724 837 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SEPT7Q16181 437 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 LRIT3Q3SXY7 679 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CCDC178Q5BJE1 867 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 DPY19L2P1Q6NXN4 242 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 DARS2Q6PI48 645 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 CRIP3Q6Q6R5 217 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 C1orf210Q8IVY1 113 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TCEAL8Q8IYN2 117 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TTC5Q8N0Z6 440 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 RCBTB1Q8NDN9 531 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 RUBCNQ92622 972 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TIFAQ96CG3 184 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SCLYQ96I15 445 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 SIN3AQ96ST3 1273 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 PANK3Q9H999 370 aa2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 DDX21Q9NR30 783 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMCHD1-211ENST00000584897 TMOD3Q9NYL9 352 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms