RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 ACKR2O00590 384 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 DPYSL4O14531 572 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 DCLK1O15075 740 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 EPHA5P54756 1037 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 CREB5Q02930 508 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 DCAF4L1Q3SXM0 396 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 TPGS2Q68CL5 300 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 C1orf228Q6PIY5 440 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 LRSAM1Q6UWE0 723 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 ARID3BQ8IVW6 561 aaPredicted RBP15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 DEPTORQ8TB45 409 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 GATA6Q92908 595 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 YTHDC1Q96MU7 727 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 PGLYRP2Q96PD5 576 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 HHIPQ96QV1 700 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 C2orf40Q9H1Z8 148 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 AFF4Q9UHB7 1163 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 PCDHA12Q9UN75 941 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 SLC8A2Q9UPR5 921 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 WASF3Q9UPY6 502 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 PCDHGA5Q9Y5G8 931 aa15.52■□□□□ 0.08
CSNK1D-224ENST00000584672 SYN3O14994 580 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 OR4Q2P0C623 313 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 TOB2Q14106 344 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 PLK5Q496M5 336 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 NT5DC1Q5TFE4 455 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 ATF7IP2Q5U623 682 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 ZNF280DQ6N043 979 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 TMC8Q8IU68 726 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 TMEM130Q8N3G9 435 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 LEMD2Q8NC56 503 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 E2F7Q96AV8 911 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 C18orf25Q96B23 403 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 ZMAT2Q96NC0 199 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 NBEAQ8NFP9 2946 aa15.51■□□□□ 0.07
CSNK1D-224ENST00000584672 PRAMEF12O95522 483 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 MCM4P33991 863 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 TXKP42681 527 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 MRPL58Q14197 206 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 CALCRLQ16602 461 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 ARHGAP29Q52LW3 1261 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 DAB2IPQ5VWQ8 1189 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 HAUS6Q7Z4H7 955 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 FBXL16Q8N461 479 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 MCPH1Q8NEM0 835 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 KCNB2Q92953 911 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 NAP1L4Q99733 375 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 LRRC3Q9BY71 257 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 GPR88Q9GZN0 384 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 DUSP15Q9H1R2 295 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 DNAJC25Q9H1X3 360 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 CRISPLD1Q9H336 500 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 TTC12Q9H892 705 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 INVSQ9Y283 1065 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 WDFY3Q8IZQ1 3526 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 NUP205Q92621 2012 aa15.5■□□□□ 0.07
CSNK1D-224ENST00000584672 LNP1A1A4G5 178 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 TMEM8BA6NDV4 472 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 CAVIN2O95810 425 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 CDR1P51861 262 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 YARSP54577 528 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 EVCP57679 992 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 NR5A1Q13285 461 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 BMP2KLQ5H9B9 411 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 GPR158Q5T848 1215 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 SYNPOQ8N3V7 929 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 ZC3H10Q96K80 434 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 TMEM209Q96SK2 561 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 MKNK1Q9BUB5 465 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 SMG9Q9H0W8 520 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 ATXN3LQ9H3M9 355 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 TIMM13Q9Y5L4 95 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 CITO14578 2027 aa15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 SETXQ7Z333 2677 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-224ENST00000584672 GCN1Q92616 2671 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 WNT7AO00755 349 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 RNF40O75150 1001 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 CDC45O75419 566 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 SOAT2O75908 522 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 VNN2O95498 520 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 HARSP12081 509 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 HSPA4P34932 840 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 NAMPTP43490 491 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 CYP4F8P98187 520 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 DUSP4Q13115 394 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 ELF2Q15723 593 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 UAP1L1Q3KQV9 507 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 FSTL4Q6MZW2 842 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 CPLX2Q6PUV4 134 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 DEFB124Q8NES8 71 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 DDX12PQ92771 950 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 SUSD3Q96L08 255 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 TBC1D32Q96NH3 1257 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 CCDC94Q9BW85 323 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 CDT1Q9H211 546 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 SLC38A7Q9NVC3 462 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 SLC27A5Q9Y2P5 690 aa15.48■□□□□ 0.07
CSNK1D-224ENST00000584672 ITPR1Q14643 2758 aa15.47■□□□□ 0.07
CSNK1D-224ENST00000584672 CCDC163A0A0D9SF12 145 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms