RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 THP07101 528 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 ADRB1P08588 477 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 XRCC6P12956 609 aaKnown RBP eCLIP5.89□□□□□ -1.47
VAPA-207ENST00000583879 RHOQP17081 205 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 FGFR3P22607 806 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 GLRA2P23416 452 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 OR1D2P34982 312 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 RBM25P49756 843 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 NRLP54845 237 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 CYP4A11Q02928 519 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 SPIRE1Q08AE8 756 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 MTAPQ13126 283 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 PABPC1LQ4VXU2 614 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 NCAPH2Q6IBW4 605 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 CPLX2Q6PUV4 134 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 RIPOR1Q6ZS17 1223 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 TPRG1Q6ZUI0 275 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 RUFY3Q7L099 469 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 SLFN12Q8IYM2 578 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 CELF5Q8N6W0 485 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 SLC7A14Q8TBB6 771 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 ASAP3Q8TDY4 903 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 EPS8L1Q8TE68 723 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 HASPINQ8TF76 798 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 ELSPBP1Q96BH3 223 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 PRIMPOLQ96LW4 560 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 AIFM3Q96NN9 605 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 NAP1L4Q99733 375 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 KXD1Q9BQD3 176 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 EIF2AK1Q9BQI3 630 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 PLA2G2FQ9BZM2 168 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 FZD8Q9H461 694 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 PARD6AQ9NPB6 346 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 SNTG2Q9NY99 539 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 GDE1Q9NZC3 331 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 USP18Q9UMW8 372 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 PCDHA12Q9UN75 941 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 KCNJ14Q9UNX9 436 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 SMG5Q9UPR3 1016 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 MRPS23Q9Y3D9 190 aaKnown RBP5.89□□□□□ -1.47
VAPA-207ENST00000583879 DENND4AQ7Z401 1863 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 ZMYM2Q9UBW7 1377 aa5.89□□□□□ -1.47
VAPA-207ENST00000583879 DMXL1Q9Y485 3027 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 SPTBN4Q9H254 2564 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 A0A087WWV3 80 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 MAN2B1O00754 1011 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 PTGESO14684 152 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 B3GAT3O94766 335 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 RHOP08100 348 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 PTPN2P17706 415 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 XBP1P17861 261 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 RARRES1P49788 294 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 RNF144AP50876 292 aaPredicted RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 SPEM2Q0P670 501 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 TOB2Q14106 344 aaPredicted RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 PPP2R5DQ14738 602 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 NAB2Q15742 525 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 DBN1Q16643 649 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 FAM187BQ17R55 369 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 EARS2Q5JPH6 523 aaKnown RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 TANGO2Q6ICL3 276 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 PIK3AP1Q6ZUJ8 805 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 SKAP1Q86WV1 359 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 KDF1Q8NAX2 398 aaPredicted RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 ZNF461Q8TAF7 563 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 ING5Q8WYH8 240 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 FAM3CQ92520 227 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 ACDQ96AP0 544 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 OCSTAMPQ9BR26 566 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 CXCL16Q9H2A7 254 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 LMAN1LQ9HAT1 526 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 ZFP14Q9HCL3 533 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 TRPV5Q9NQA5 729 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 AVENQ9NQS1 362 aaPredicted RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 PRMT8Q9NR22 394 aaPredicted RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 HEBP1Q9NRV9 189 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 PRMT7Q9NVM4 692 aaPredicted RBP5.88□□□□□ -1.47
VAPA-207ENST00000583879 MTRRQ9UBK8 725 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 GMEB2Q9UKD1 530 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 RAB23Q9ULC3 237 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 BACE2Q9Y5Z0 518 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 CDY1Q9Y6F8 540 aa5.88□□□□□ -1.47
VAPA-207ENST00000583879 MYH9P35579 1960 aaKnown RBP5.87□□□□□ -1.47
VAPA-207ENST00000583879 GVINP1Q7Z2Y8 2422 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 ARHGEF37A1IGU5 675 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 LRRIQ4A6NIV6 560 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 TMEM189-UBE2V1I3L0A0 370 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 ACKR2O00590 384 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 ZNF197O14709 1029 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 SLC30A4O14863 429 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 N4BP3O15049 544 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 TRAPPC3O43617 180 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 RECQL4O94761 1208 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 MICAL2O94851 1124 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 ABLIM3O94929 683 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 CLSTN1O94985 981 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 RETP07949 1114 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 TDGF1P13385 188 aa5.87□□□□□ -1.47
VAPA-207ENST00000583879 IGFBP6P24592 240 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms