RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CRISPLD1Q9H336 500 aa17.65■□□□□ 0.42
SREBF1-221ENST00000583080 SLITRK6Q9H5Y7 841 aa17.65■□□□□ 0.42
SREBF1-221ENST00000583080 TRPV4Q9HBA0 871 aa17.65■□□□□ 0.42
SREBF1-221ENST00000583080 RBM12Q9NTZ6 932 aaKnown RBP17.65■□□□□ 0.42
SREBF1-221ENST00000583080 RAB23Q9ULC3 237 aa17.65■□□□□ 0.42
SREBF1-221ENST00000583080 PCDHB8Q9UN66 801 aa17.65■□□□□ 0.42
SREBF1-221ENST00000583080 SLC38A8A6NNN8 435 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 CHURC1-FNTBB4DL54 471 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 HOXC13P31276 330 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 FNTBP49356 437 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 NRLP54845 237 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 SPAG1Q07617 926 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 PPP2R5DQ14738 602 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 NOLC1Q14978 699 aaKnown RBP eCLIP17.64■□□□□ 0.41
SREBF1-221ENST00000583080 RINT1Q6NUQ1 792 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 Q6ZS52 159 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 TMC8Q8IU68 726 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 GPIHBP1Q8IV16 184 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 MFSD6LQ8IWD5 586 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 CELF5Q8N6W0 485 aaKnown RBP17.64■□□□□ 0.41
SREBF1-221ENST00000583080 IGSF22Q8N9C0 903 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 LEMD2Q8NC56 503 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 APPL2Q8NEU8 664 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 BEST2Q8NFU1 509 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 DRC1Q96MC2 740 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 PGLYRP2Q96PD5 576 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 LRRC3Q9BY71 257 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 DNAJC25Q9H1X3 360 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 C2orf42Q9NWW7 574 aa17.64■□□□□ 0.41
SREBF1-221ENST00000583080 TIMM13Q9Y5L4 95 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-221ENST00000583080 MAP1BP46821 2468 aaKnown RBP17.64■□□□□ 0.41
SREBF1-221ENST00000583080 A0A1W2PRU2 124 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 SFI1A8K8P3 1242 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 CXCL8P10145 99 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 CDC25AP30304 524 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 CXCL12P48061 93 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 PTGDRQ13258 359 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 TXNDC11Q6PKC3 985 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 C1orf186Q6ZWK4 172 aa17.63■□□□□ 0.41
SREBF1-221ENST00000583080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-221ENST00000583080 K7ESF4 209 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 M0QZQ0 153 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 HRO43593 1189 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 RETP07949 1114 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 ADRB1P08588 477 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 TRAPPC10P48553 1259 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 TOB1P50616 345 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-221ENST00000583080 YWHAHQ04917 246 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-221ENST00000583080 RAD51AP2Q09MP3 1159 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 SIM2Q14190 667 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-221ENST00000583080 IL17AQ16552 155 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 FBXO18Q8NFZ0 1043 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 TTC8Q8TAM2 541 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 NETO1Q8TDF5 533 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 CSGALNACT1Q8TDX6 532 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 LRRC3BQ96PB8 259 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 MMTAG2Q9BU76 263 aaKnown RBP17.62■□□□□ 0.41
SREBF1-221ENST00000583080 HAPLN2Q9GZV7 340 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 SEMA4GQ9NTN9 838 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 MAFFQ9ULX9 164 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 DNM3Q9UQ16 869 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
SREBF1-221ENST00000583080 PCDHB6Q9Y5E3 794 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 CHD8Q9HCK8 2581 aa17.62■□□□□ 0.41
SREBF1-221ENST00000583080 TSC2P49815 1807 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 SLC30A4O14863 429 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 TOM1L1O75674 476 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 OAZ2O95190 189 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 MARCKSP29966 332 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-221ENST00000583080 GUCY2FP51841 1108 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 FCHO2Q0JRZ9 810 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
SREBF1-221ENST00000583080 PDIA5Q14554 519 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 PPM1JQ5JR12 505 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 HEATR6Q6AI08 1181 aaKnown RBP17.61■□□□□ 0.41
SREBF1-221ENST00000583080 PRR23CQ6ZRP0 262 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 YAF2Q8IY57 180 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 SPEM1Q8N4L4 309 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 TTC9BQ8N6N2 239 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 TMEM161BQ8NDZ6 487 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 ZFYVE19Q96K21 471 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 MKNK1Q9BUB5 465 aa17.61■□□□□ 0.41
SREBF1-221ENST00000583080 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
SREBF1-221ENST00000583080 NUP210Q8TEM1 1887 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-221ENST00000583080 CHADO15335 359 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 GDF9O60383 454 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 SOAT2O75908 522 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 MAPTP10636 758 aaKnown RBP17.6■□□□□ 0.41
SREBF1-221ENST00000583080 LRPAP1P30533 357 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 CTHP32929 405 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 AARSP49588 968 aaKnown RBP eCLIP17.6■□□□□ 0.41
SREBF1-221ENST00000583080 KPNA1P52294 538 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-221ENST00000583080 STRN3Q13033 797 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 DUSP4Q13115 394 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 LRRC32Q14392 662 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 KRT79Q5XKE5 535 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-221ENST00000583080 ARID3BQ8IVW6 561 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-221ENST00000583080 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
SREBF1-221ENST00000583080 SLC27A5Q9Y2P5 690 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms