RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	FAM30A	Q9NZY2	134 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	POGK	Q9P215	609 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	EIF2B4	Q9UI10	523 aa	Known RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	INTU	Q9ULD6	942 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	IFT172	Q9UG01	1749 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	ASXL1	Q8IXJ9	1541 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	PTPRU	Q92729	1446 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	KIF1B	O60333	1816 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	PPL	O60437	1756 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	KIAA1210	Q9ULL0	1709 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	CYR61	O00622	381 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	SGTA	O43765	313 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	NARS	O43776	548 aa	Known RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	FAM20B	O75063	409 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	SCGB1D2	O95969	90 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	RAP2A	P10114	183 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	ATP5J	P18859	108 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	MAK	P20794	623 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	CCND1	P24385	295 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	APOBEC3A	P31941	199 aa	Predicted RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	MCM7	P33993	719 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	PTGS2	P35354	604 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	ACVRL1	P37023	503 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	RECQL	P46063	649 aa	Predicted RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	ALDH1A3	P47895	512 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	ADK	P55263	362 aa	Known RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	NHLH2	Q02577	135 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	ABHD18	Q0P651	414 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	MTM1	Q13496	603 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	PIN1	Q13526	163 aa	Predicted RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	FNDC7	Q5VTL7	733 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	SYT12	Q8IV01	421 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	RHOT1	Q8IXI2	618 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	RNF169	Q8NCN4	708 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	FBXO18	Q8NFZ0	1043 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	CCHCR1	Q8TD31	782 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	DPF2	Q92785	391 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	HDAC10	Q969S8	669 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	MRI1	Q9BV20	369 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	SLC46A2	Q9BY10	475 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	TMPRSS5	Q9H3S3	457 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	LDAH	Q9H6V9	325 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	LRRC7	Q96NW7	1537 aa		4.05	□□□□□ -1.76
MSI2-215	ENST00000582453	XRN1	Q8IZH2	1706 aa	Known RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	PNPLA7	Q6ZV29	1317 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	GAGE12B	A1L429	117 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	GAGE12H	A6NDE8	117 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	AHRR	A9YTQ3	701 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	LEFTY2	O00292	366 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	WNT10B	O00744	389 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	HTRA2	O43464	458 aa	Predicted RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ABLIM3	O94929	683 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	FSHB	P01225	129 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	AMY1A	P04745	511 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ZSCAN20	P17040	1043 aa	Predicted RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	DDC	P20711	480 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	FPR1	P21462	350 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	PCSK1	P29120	753 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ATP8B2	P98198	1209 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	CDC42EP1	Q00587	391 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	KIF23	Q02241	960 aa	Predicted RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ODF1	Q14990	250 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	PPP2R5A	Q15172	486 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ATP2B3	Q16720	1220 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	SEM1	Q6ZVN7	128 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	GDF7	Q7Z4P5	450 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	PLXDC1	Q8IUK5	500 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	SLC16A11	Q8NCK7	471 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	STON2	Q8WXE9	905 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	HAS1	Q92839	578 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	LENG9	Q96B70	501 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	COA7	Q96BR5	231 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	CHMP4C	Q96CF2	233 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	TDP1	Q9NUW8	608 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	GPRC5B	Q9NZH0	403 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	GABBR1	Q9UBS5	961 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	SRRD	Q9UH36	339 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	TCEAL9	Q9UHQ7	104 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	FZD1	Q9UP38	647 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	REXO2	Q9Y3B8	237 aa	Known RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	CHST2	Q9Y4C5	530 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	IPP	Q9Y573	584 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ACTL7A	Q9Y615	435 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	HS3ST3A1	Q9Y663	406 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	SETD1A	O15047	1707 aa	Known RBP	4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	ADGRL3	Q9HAR2	1447 aa		4.04	□□□□□ -1.76
MSI2-215	ENST00000582453	TMEM94	Q12767	1356 aa		4.03	□□□□□ -1.76
MSI2-215	ENST00000582453	EIF3A	Q14152	1382 aa	Known RBP	4.03	□□□□□ -1.76
MSI2-215	ENST00000582453	E2F8	A0AVK6	867 aa		4.03	□□□□□ -1.76
MSI2-215	ENST00000582453	CCDC154	A6NI56	674 aa		4.03	□□□□□ -1.76
MSI2-215	ENST00000582453	DRGX	A6NNA5	263 aa		4.03	□□□□□ -1.76
MSI2-215	ENST00000582453	RNASET2	O00584	256 aa	Known RBP	4.03	□□□□□ -1.76
MSI2-215	ENST00000582453	SNUPN	O95149	360 aa	Known RBP	4.03	□□□□□ -1.76
MSI2-215	ENST00000582453	MAP4K4	O95819	1239 aa	Predicted RBP	4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms