RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ANK1P16157 1881 aa13.54□□□□□ -0.24
SRSF1-204ENST00000581979 GOLGA6L9A6NEM1 432 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 MGEA5O60502 916 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 IPO7O95373 1038 aaKnown RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 PLEKP08567 350 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 STAT1P42224 750 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 JAM2P57087 298 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 BIRC3Q13489 604 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 PHLDB3Q6NSJ2 640 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 REXO1L1PQ8IX06 675 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 ZNF516Q92618 1163 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 RGS18Q9NS28 235 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 C1orf112Q9NSG2 853 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 COQ4Q9Y3A0 265 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 AKR1B10O60218 316 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 LRRN2O75325 713 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 C4BPAP04003 597 aaKnown RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 EIF4A3P38919 411 aaKnown RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 DRAP1Q14919 205 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 COL19A1Q14993 1142 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 PCBP1Q15365 356 aaKnown RBP eCLIP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 KYAT1Q16773 422 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 ZACNQ401N2 412 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 C15orf39Q6ZRI6 1047 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 APBB1IPQ7Z5R6 666 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 ARHGEF19Q8IW93 802 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 CEP120Q8N960 986 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 SEMA4DQ92854 862 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 NT5C1BQ96P26 610 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 NECAB3Q96P71 396 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 ADAM2Q99965 735 aa13.53□□□□□ -0.24
SRSF1-204ENST00000581979 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.243e-6■■■□□ 19.1
SRSF1-204ENST00000581979 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
SRSF1-204ENST00000581979 PTPRJQ12913 1337 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 MYO7AQ13402 2215 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 SSU72P8A0A1W2PR75 194 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 EIF3CLB5ME19 914 aaKnown RBP13.52□□□□□ -0.25
SRSF1-204ENST00000581979 C9IYK1 514 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 F8VZ95 297 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 PHACTR2O75167 634 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 TNNT1P13805 278 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 FERP16591 822 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 EIF4BP23588 611 aaKnown RBP13.52□□□□□ -0.25
SRSF1-204ENST00000581979 PIK3CAP42336 1068 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 AP3M2P53677 418 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 KRT83P78385 493 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
SRSF1-204ENST00000581979 DCAF4L1Q3SXM0 396 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 LEXMQ3ZCV2 418 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 TDRD10Q5VZ19 366 aaKnown RBP13.52□□□□□ -0.25
SRSF1-204ENST00000581979 HGSNATQ68CP4 663 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 SLC24A5Q71RS6 500 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 FMNL3Q8IVF7 1028 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 FAM84AQ96KN4 292 aa13.52□□□□□ -0.25
SRSF1-204ENST00000581979 EIF3CQ99613 913 aaKnown RBP13.52□□□□□ -0.25
SRSF1-204ENST00000581979 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.25
SRSF1-204ENST00000581979 GRM6O15303 877 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRSF1-204ENST00000581979 GFPT2O94808 682 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 CLSTN1O94985 981 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 IL18RAPO95256 599 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 HLA-DRAP01903 254 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 CLTAP09496 248 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 CXCL8P10145 99 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 AXLP30530 894 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 SOX5P35711 763 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 KIF11P52732 1056 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 MFAP3P55082 362 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 FAM189BP81408 668 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 DSC3Q14574 896 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 SPA17Q15506 151 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 TCEAL5Q5H9L2 206 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 WDR44Q5JSH3 913 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 NOTUMQ6P988 496 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.51□□□□□ -0.25
SRSF1-204ENST00000581979 NYAP1Q6ZVC0 841 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 PPM1KQ8N3J5 372 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 PCDHB7Q9Y5E2 793 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 BZW2Q9Y6E2 419 aaKnown RBP13.51□□□□□ -0.25
SRSF1-204ENST00000581979 ATG2AQ2TAZ0 1938 aa13.51□□□□□ -0.25
SRSF1-204ENST00000581979 OFD1O75665 1012 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 NPTXRO95502 500 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 TNNC2P02585 160 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 TMEM191BP0C7N4 346 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 CCDC172P0C7W6 258 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 PNMA6AP0CW24 399 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms