RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 SLFN11Q7Z7L1 901 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 CD302Q8IX05 232 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 NME8Q8N427 588 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 PDCL2Q8N4E4 241 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 PAWRQ96IZ0 340 aaKnown RBP15.64■□□□□ 0.09
MKS1-211ENST00000581761 CALR3Q96L12 384 aaKnown RBP15.64■□□□□ 0.09
MKS1-211ENST00000581761 HTATIP2Q9BUP3 242 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 GOLPH3Q9H4A6 298 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 OSGEPQ9NPF4 335 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 SIX4Q9UIU6 781 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 PACSIN2Q9UNF0 486 aaPredicted RBP15.64■□□□□ 0.09
MKS1-211ENST00000581761 CNTN6Q9UQ52 1028 aa15.64■□□□□ 0.09
MKS1-211ENST00000581761 THAP12O43422 761 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 ADAMTS4O75173 837 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 ITGB3P05106 788 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 CD58P19256 250 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 EIF4BP23588 611 aaKnown RBP15.63■□□□□ 0.09
MKS1-211ENST00000581761 CXCR5P32302 372 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 ZNF132P52740 706 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 CRYBB1P53674 252 aaPredicted RBP15.63■□□□□ 0.09
MKS1-211ENST00000581761 TCEAL1Q15170 157 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 NBPF20Q3BBV1 942 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 ZNF667Q5HYK9 610 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 TAF2Q6P1X5 1199 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 CXCL17Q6UXB2 119 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 TRIM72Q6ZMU5 477 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 DAAM2Q86T65 1068 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 NT5DC4Q86YG4 428 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 CREG2Q8IUH2 290 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 C1orf127Q8N9H9 656 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 ANKLE1Q8NAG6 615 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 KIF12Q96FN5 646 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 XYLT2Q9H1B5 865 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 EPC1Q9H2F5 836 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 XPNPEP3Q9NQH7 507 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 SNTG2Q9NY99 539 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 NXF1Q9UBU9 619 aaKnown RBP15.63■□□□□ 0.09
MKS1-211ENST00000581761 GTF3C4Q9UKN8 822 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 AMFRQ9UKV5 643 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 POLIQ9UNA4 740 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 STXBP5LQ9Y2K9 1186 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 C2CD2Q9Y426 696 aa15.63■□□□□ 0.09
MKS1-211ENST00000581761 ATMINO43313 823 aaPredicted RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 BUB1BO60566 1050 aaPredicted RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 CYP1A2P05177 515 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 COL6A1P12109 1028 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 UNGP13051 313 aaPredicted RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 POLR2BP30876 1174 aaKnown RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 ATICP31939 592 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 ASPAP45381 313 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 YARSP54577 528 aaKnown RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 HADHBP55084 474 aaKnown RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 NKX3-2P78367 333 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 PTPROQ16827 1216 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 FAM47CQ5HY64 1035 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 SMYD5Q6GMV2 418 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 FBXO38Q6PIJ6 1188 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 TMEM130Q8N3G9 435 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 NOA1Q8NC60 698 aaKnown RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 EIF2AQ9BY44 585 aaKnown RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 TRIM6Q9C030 488 aaPredicted RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 CISHQ9NSE2 258 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 ARGLU1Q9NWB6 273 aaPredicted RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 GTF2IRD1Q9UHL9 959 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 COG5Q9UP83 839 aa15.62■□□□□ 0.09
MKS1-211ENST00000581761 PIN4Q9Y237 131 aaKnown RBP15.62■□□□□ 0.09
MKS1-211ENST00000581761 FRMPD3Q5JV73 1810 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 RANBP2P49792 3224 aaKnown RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 TMEM110-MUSTN1A8MSY1 372 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 H0YGN5 161 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 M0QZ92 97 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 KCNK3O14649 394 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 MTA2O94776 668 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 CYP1A1P04798 512 aaPredicted RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 WEE2P0C1S8 567 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 RHOXF2BP0C7M4 288 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 GUCY2FP51841 1108 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 MRPS6P82932 125 aaKnown RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 RBP5P82980 135 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 C2orf54Q08AI8 447 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 CFAP221Q4G0U5 840 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 NAA35Q5VZE5 725 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 CCSAPQ6IQ19 270 aaPredicted RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 ZNF572Q7Z3I7 529 aaPredicted RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 RSPH3Q86UC2 560 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 NT5DC3Q86UY8 548 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 KLHDC9Q8NEP7 349 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 TMEM40Q8WWA1 233 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 TRIM11Q96F44 468 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 PBKQ96KB5 322 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 SNX27Q96L92 541 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 RHOXF2Q9BQY4 288 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 NUP85Q9BW27 656 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 CELF4Q9BZC1 486 aaKnown RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 PLEKHA5Q9HAU0 1116 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 DPP3Q9NY33 737 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 SMARCAL1Q9NZC9 954 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms