RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ADGRG5Q8IZF4 528 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 CCHCR1Q8TD31 782 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 ZBTB9Q96C00 473 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 LRIG1Q96JA1 1093 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 C11orf54Q9H0W9 315 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 MYBBP1AQ9BQG0 1328 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 KIAA0391O15091 583 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 PRR35P0CG20 571 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 PPP3CBP16298 524 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 CTXN1P60606 82 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 MC2RQ01718 297 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 CD300EQ496F6 205 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 MTX3Q5HYI7 312 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 NLGN4YQ8NFZ3 816 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 WASF1Q92558 559 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 CCM2LQ9NUG4 571 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 BTBD3Q9Y2F9 522 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 NEU2Q9Y3R4 380 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 PCDHGA2Q9Y5H1 932 aa4.8□□□□□ -1.64
SMCHD1-206ENST00000581631 GCOM1H8Y6P7 765 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 CHRM2P08172 466 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 SBK3P0C264 359 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 HOXB6P17509 224 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 PTGER1P34995 402 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 ANXA11P50995 505 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 SCAND1P57086 179 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 RASAL3Q86YV0 1011 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 TOR1AIP2Q8NFQ8 470 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 KLHL32Q96NJ5 620 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 MANSC1Q9H8J5 431 aa4.79□□□□□ -1.64
SMCHD1-206ENST00000581631 ADGRA2Q96PE1 1338 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 TRIM38O00635 465 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 AGFG2O95081 481 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 PCSK6P29122 969 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 SLC5A3P53794 718 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 FPGSQ05932 587 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 FLYWCH1Q4VC44 716 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 ZNF66Q6ZN08 573 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 DDX46Q7L014 1031 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 RFKQ969G6 155 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 KLC4Q9NSK0 619 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 ST3GAL5Q9UNP4 418 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 CDYLQ9Y232 598 aa4.78□□□□□ -1.64
SMCHD1-206ENST00000581631 ENPP3O14638 875 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 MOSPD3O75425 235 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 IGKV2-30P06310 120 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 OSMP13725 252 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 DRD4P21917 467 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 WASP42768 502 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 STRN3Q13033 797 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 TARDBPQ13148 414 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 HLXQ14774 488 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 CRELD2Q6UXH1 353 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 PBKQ96KB5 322 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 FCRL4Q96PJ5 515 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 HAPLN3Q96S86 360 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 SEMA4CQ9C0C4 833 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 ZNF277Q9NRM2 450 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 C14orf119Q9NWQ9 140 aa4.77□□□□□ -1.65
SMCHD1-206ENST00000581631 CCDC195A0A1B0GUA6 201 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 E7ENX8 843 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 POU3F3P20264 500 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 NXPH1P58417 271 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 TUBA4AP68366 448 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 TAP2Q03519 686 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 GRM1Q13255 1194 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 ETFDHQ16134 617 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 UTP14CQ5TAP6 766 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 NEK8Q86SG6 692 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 IL17RDQ8NFM7 739 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 BRIP1Q9BX63 1249 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 DNAJC28Q9NX36 388 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 JKAMPQ9P055 326 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 ZBTB21Q9ULJ3 1066 aa4.76□□□□□ -1.65
SMCHD1-206ENST00000581631 GRM6O15303 877 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 SLC43A1O75387 559 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 URI1O94763 535 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 KELP23276 732 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 POU6F2P78424 691 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 CREMQ03060 361 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 ITIH3Q06033 890 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 ZNF844Q08AG5 666 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 PROSER3Q2NL68 480 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 PABPC1LQ4VXU2 614 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 MORN5Q5VZ52 161 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 CFAP52Q8N1V2 620 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 AFAP1L2Q8N4X5 818 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 TMIEQ8NEW7 156 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 IFI44Q8TCB0 444 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 SNX19Q92543 992 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 DPF2Q92785 391 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 REPS1Q96D71 796 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 PADI4Q9UM07 663 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 DNM3Q9UQ16 869 aa4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-206ENST00000581631 E9PLN8 166 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 NTN1O95631 604 aa4.74□□□□□ -1.65
SMCHD1-206ENST00000581631 EYA4O95677 639 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms