RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 IQCEQ6IPM2 695 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 MAMSTRQ6ZN01 415 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 PDZD4Q76G19 769 aaPredicted RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 ZNF687Q8N1G0 1237 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 LEMD2Q8NC56 503 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 ZBTB44Q8NCP5 570 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 BEST2Q8NFU1 509 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 SMARCD2Q92925 531 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 ASB16Q96NS5 453 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 TSPAN18Q96SJ8 248 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 TRMT61BQ9BVS5 477 aaKnown RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 TRPV4Q9HBA0 871 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 TRPV5Q9NQA5 729 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 HEBP1Q9NRV9 189 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 CEP72Q9P209 647 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 LARSQ9P2J5 1176 aaKnown RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 ANKFY1Q9P2R3 1169 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 RAB23Q9ULC3 237 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 PCDHGA2Q9Y5H1 932 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 CITO14578 2027 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 MAN2B1O00754 1011 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 MOSPD3O75425 235 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 ADRB2P07550 413 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 PLA2G4BP0C869 781 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 SCP2P22307 547 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 AARSP49588 968 aaKnown RBP eCLIP11.55□□□□□ -0.56
RFFL-209ENST00000581265 KYAT1Q16773 422 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 ARSHQ5FYA8 562 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 MCTP1Q6DN14 999 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 HAUS6Q7Z4H7 955 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 MAP4K3Q8IVH8 894 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 HS6ST3Q8IZP7 471 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 ELMOD1Q8N336 334 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 IRF7Q92985 503 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 ZSWIM3Q96MP5 696 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 GPR88Q9GZN0 384 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 HAPLN2Q9GZV7 340 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 ANGPTL2Q9UKU9 493 aa11.55□□□□□ -0.56
RFFL-209ENST00000581265 UBQLN1Q9UMX0 589 aaKnown RBP11.55□□□□□ -0.56
RFFL-209ENST00000581265 MIA3Q5JRA6 1907 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 BAHCC1Q9P281 2608 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 VWA3AA6NCI4 1184 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 NRG2O14511 850 aaPredicted RBP11.54□□□□□ -0.56
RFFL-209ENST00000581265 SLC26A4O43511 780 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 LILRB5O75023 590 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 CXCL8P10145 99 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 PSMC3P17980 439 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 NCKAP1LP55160 1127 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 YWHAHQ04917 246 aaPredicted RBP11.54□□□□□ -0.56
RFFL-209ENST00000581265 SPAG1Q07617 926 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 TWF1Q12792 350 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 GPR17Q13304 367 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 TMEM119Q4V9L6 283 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 RNF19BQ6ZMZ0 732 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 NETO1Q8TDF5 533 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 CDK5RAP3Q96JB5 506 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 AK8Q96MA6 479 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 PLIN2Q99541 437 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 FAM126AQ9BYI3 521 aaPredicted RBP11.54□□□□□ -0.56
RFFL-209ENST00000581265 ZNF334Q9HCZ1 680 aaPredicted RBP11.54□□□□□ -0.56
RFFL-209ENST00000581265 ZSCAN32Q9NX65 697 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 ODF2LQ9ULJ1 636 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 COL4A3Q01955 1670 aa11.54□□□□□ -0.56
RFFL-209ENST00000581265 NPHP3-ACAD11A0A0J9YXS1 232 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 LACTBL1A8MY62 500 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 FAM189A1O60320 539 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 VNN2O95498 520 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 PIGRP01833 764 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 MYL4P12829 197 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 CPB1P15086 417 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 MLLT6P55198 1093 aaPredicted RBP11.53□□□□□ -0.56
RFFL-209ENST00000581265 MTAPQ13126 283 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 GRM2Q14416 872 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 RABEP1Q15276 862 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 VITQ6UXI7 678 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 MFSD6LQ8IWD5 586 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 ZSCAN18Q8TBC5 510 aaPredicted RBP11.53□□□□□ -0.56
RFFL-209ENST00000581265 DEPDC1BQ8WUY9 529 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 E2F7Q96AV8 911 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 LRRC3Q9BY71 257 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 PRMT8Q9NR22 394 aaPredicted RBP11.53□□□□□ -0.56
RFFL-209ENST00000581265 ASAH2Q9NR71 780 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 TBX20Q9UMR3 447 aa11.53□□□□□ -0.56
RFFL-209ENST00000581265 TIMM13Q9Y5L4 95 aaPredicted RBP11.53□□□□□ -0.56
RFFL-209ENST00000581265 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.56
RFFL-209ENST00000581265 A0A0B4J269 797 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.52□□□□□ -0.57
RFFL-209ENST00000581265 OR6C75A6NL08 312 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 SLC30A4O14863 429 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 OGTO15294 1046 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 XPOTO43592 962 aaKnown RBP11.52□□□□□ -0.57
RFFL-209ENST00000581265 GJA1P17302 382 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 TYMPP19971 482 aa11.52□□□□□ -0.57
RFFL-209ENST00000581265 PAX3P23760 479 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms