RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 BLIDQ8IZY5 108 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 COL26A1Q96A83 441 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 EDEM2Q9BV94 578 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 ADAM33Q9BZ11 813 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 POLR3FQ9H1D9 316 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-210ENST00000580713 CXCL16Q9H2A7 254 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 VPS45Q9NRW7 570 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 GDAQ9Y2T3 454 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
TOP3A-210ENST00000580713 ZZEF1O43149 2961 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 SPECC1L-ADORA2AF8WAN1 911 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 DPYSL4O14531 572 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 N4BP3O15049 544 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 STX6O43752 255 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 EXTL3O43909 919 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 DEXIO95424 95 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 SEC24AO95486 1093 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 PRKCBP05771 671 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 PDIA4P13667 645 aaKnown RBP11.79□□□□□ -0.52
TOP3A-210ENST00000580713 LIG1P18858 919 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 SYT1P21579 422 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 GLRA2P23416 452 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 ARL2P36404 184 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 BRCC3P46736 316 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 RAP1GAPP47736 663 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 CLCNKBP51801 687 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 MLLT6P55198 1093 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-210ENST00000580713 RING1Q06587 406 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 PON2Q15165 354 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 GLRA4Q5JXX5 417 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 DAB2IPQ5VWQ8 1189 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 TCEAL6Q6IPX3 200 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 TXNDC11Q6PKC3 985 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 MAEAQ7L5Y9 396 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 NOSTRINQ8IVI9 506 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 ZCCHC14Q8WYQ9 949 aaKnown RBP11.79□□□□□ -0.52
TOP3A-210ENST00000580713 WASF1Q92558 559 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 TCEAL3Q969E4 200 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 E2F7Q96AV8 911 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 ADPGKQ9BRR6 497 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 NFKBIZQ9BYH8 718 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 ASAH2Q9NR71 780 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 PRMT7Q9NVM4 692 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-210ENST00000580713 INSL5Q9Y5Q6 135 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 VWA8A3KMH1 1905 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 TCHHQ07283 1943 aa11.79□□□□□ -0.52
TOP3A-210ENST00000580713 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-210ENST00000580713 C4orf47A7E2U8 309 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 TMEM189-UBE2V1I3L0A0 370 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 CHADO15335 359 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 DGAT1O75907 488 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 ABLIM3O94929 683 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 TOP3BO95985 862 aaKnown RBP11.78□□□□□ -0.52
TOP3A-210ENST00000580713 ATF2P15336 505 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 CTHP32929 405 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 TWF1Q12792 350 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 TEAD2Q15562 447 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 NAB2Q15742 525 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 WDR44Q5JSH3 913 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 PLA2G2CQ5R387 149 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 SH3PXD2AQ5TCZ1 1133 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 SLC8B1Q6J4K2 584 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 KRT25Q7Z3Z0 450 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 RALGPS2Q86X27 583 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-210ENST00000580713 ZBTB8OSQ8IWT0 167 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 TCEAL8Q8IYN2 117 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 PRIMPOLQ96LW4 560 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 PDZD7Q9H5P4 517 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 TRPV4Q9HBA0 871 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 SLC8A2Q9UPR5 921 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 NCANO14594 1321 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 SPAG17Q6Q759 2223 aa11.78□□□□□ -0.52
TOP3A-210ENST00000580713 CCDC194A0A1B0GVG4 234 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 MYBPHLA2RUH7 354 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 H3BQV1 296 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 H7C4K7 107 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 ARNTLO00327 626 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.53
TOP3A-210ENST00000580713 USO1O60763 962 aaKnown RBP11.77□□□□□ -0.53
TOP3A-210ENST00000580713 MOSPD3O75425 235 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 FOSBP53539 338 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 CREB5Q02930 508 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 PRPF4BQ13523 1007 aaKnown RBP11.77□□□□□ -0.53
TOP3A-210ENST00000580713 PKP1Q13835 747 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 HAUS6Q7Z4H7 955 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 SYNPOQ8N3V7 929 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 LEMD2Q8NC56 503 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 C8orf76Q96K31 380 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 UROC1Q96N76 676 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 SCNM1Q9BWG6 230 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 GPR88Q9GZN0 384 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 GOLGA2P5Q9HBQ8 144 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 CEP72Q9P209 647 aa11.77□□□□□ -0.53
TOP3A-210ENST00000580713 SLITRK3O94933 977 aa11.76□□□□□ -0.53
TOP3A-210ENST00000580713 BAG4O95429 457 aaKnown RBP11.76□□□□□ -0.53
TOP3A-210ENST00000580713 CAVIN2O95810 425 aa11.76□□□□□ -0.53
TOP3A-210ENST00000580713 ZSCAN22P10073 491 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms