RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SCLT1Q96NL6 688 aa11.15□□□□□ -0.63
TOP3A-209ENST00000580095 PPP1R16BQ96T49 567 aa11.15□□□□□ -0.63
TOP3A-209ENST00000580095 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.63
TOP3A-209ENST00000580095 MTMR12Q9C0I1 747 aa11.15□□□□□ -0.63
TOP3A-209ENST00000580095 MAP3K20Q9NYL2 800 aaKnown RBP11.15□□□□□ -0.63
TOP3A-209ENST00000580095 SAE1Q9UBE0 346 aaPredicted RBP11.15□□□□□ -0.63
TOP3A-209ENST00000580095 SPATA31C2B4DYI2 1134 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 OATP04181 439 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 FDX1P10109 184 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 ATF2P15336 505 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 NOMO3P69849 1222 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 NCOA4Q13772 614 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 TREML2Q5T2D2 321 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 C6orf118Q5T5N4 469 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 RPAINQ86UA6 219 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 SLC7A3Q8WY07 619 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 ARHGEF2Q92974 986 aaKnown RBP11.14□□□□□ -0.63
TOP3A-209ENST00000580095 ZNF317Q96PQ6 595 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-209ENST00000580095 HAUS2Q9NVX0 235 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 F8VP50 259 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 PROSCO94903 275 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 GTF2H1P32780 548 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 MNAT1P51948 309 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 HIRAP54198 1017 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-209ENST00000580095 ACTN3Q08043 901 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-209ENST00000580095 MPP2Q14168 576 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 SLMAPQ14BN4 828 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 CLUL1Q15846 466 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 ZC3H12AQ5D1E8 599 aaKnown RBP11.14□□□□□ -0.63
TOP3A-209ENST00000580095 TRAPPC12Q8WVT3 735 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 HVCN1Q96D96 273 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 SENP7Q9BQF6 1050 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 OSBPL8Q9BZF1 889 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 TJP2Q9UDY2 1190 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 PARP2Q9UGN5 583 aa11.14□□□□□ -0.63
TOP3A-209ENST00000580095 TMEM120BA0PK00 339 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 CYP1A1P04798 512 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-209ENST00000580095 PAEPP09466 180 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 MAP2K2P36507 400 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 MYL6P60660 151 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 CENPCQ03188 943 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 CAPSQ13938 189 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 FAM133BQ5BKY9 247 aaKnown RBP11.13□□□□□ -0.63
TOP3A-209ENST00000580095 TMEM63BQ5T3F8 832 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 MORC4Q8TE76 937 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 PRPF31Q8WWY3 499 aaKnown RBP11.13□□□□□ -0.63
TOP3A-209ENST00000580095 THOC1Q96FV9 657 aaKnown RBP11.13□□□□□ -0.63
TOP3A-209ENST00000580095 SNF8Q96H20 258 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 MCEEQ96PE7 176 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 PORCNQ9H237 461 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 CNOT10Q9H9A5 744 aaKnown RBP11.13□□□□□ -0.63
TOP3A-209ENST00000580095 C17orf75Q9HAS0 396 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.13□□□□□ -0.63
TOP3A-209ENST00000580095 IVNS1ABPQ9Y6Y0 642 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 GSTTP1A0A1W2PQM5 241 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 GOLGA8SH3BPF8 625 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 GOLGA8MH3BSY2 632 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 BANF1O75531 89 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 FSBPO95073 299 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 CLTAP09496 248 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 UBA1P22314 1058 aaKnown RBP11.13□□□□□ -0.63
TOP3A-209ENST00000580095 DYNLT1P63172 113 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 ANKRD20A8PQ5CZ79 823 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 ZNF365Q70YC5 407 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 RDM1Q8NG50 284 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 SLC16A10Q8TF71 515 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 PCYT2Q99447 389 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 PLVAPQ9BX97 442 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 CD248Q9HCU0 757 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 FGFR1OP2Q9NVK5 253 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 AFG3L2Q9Y4W6 797 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
TOP3A-209ENST00000580095 AGTP01019 485 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 PGK2P07205 417 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
TOP3A-209ENST00000580095 FASTKD3Q14CZ7 662 aaKnown RBP11.12□□□□□ -0.63
TOP3A-209ENST00000580095 STXBP2Q15833 593 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 CNGA2Q16280 664 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 SMTNL2Q2TAL5 461 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 DCAF15Q66K64 600 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 RHBDF2Q6PJF5 856 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 SRRM1Q8IYB3 904 aaKnown RBP11.12□□□□□ -0.63
TOP3A-209ENST00000580095 THNSL1Q8IYQ7 743 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 ZNF513Q8N8E2 541 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-209ENST00000580095 C12orf50Q8NA57 414 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-209ENST00000580095 ZNF606Q8WXB4 792 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 ITFG2Q969R8 447 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 NINJ2Q9NZG7 142 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 DNPEPQ9ULA0 475 aa11.12□□□□□ -0.63
TOP3A-209ENST00000580095 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.12□□□□□ -0.63
TOP3A-209ENST00000580095 ZNFX1Q9P2E3 1918 aaKnown RBP11.12□□□□□ -0.63
TOP3A-209ENST00000580095 A0A0B4J269 797 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms