RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 EEF1DP3Q658K8 133 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PPP4R3AQ6IN85 833 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 MOXD1Q6UVY6 613 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CYP2U1Q7Z449 544 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ZBTB8OSQ8IWT0 167 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 BLIDQ8IZY5 108 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PIGKQ92643 395 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ATXN3LQ9H3M9 355 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 AFF4Q9UHB7 1163 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 VWA8A3KMH1 1905 aa14.5□□□□□ -0.09
CDK5RAP3-213ENST00000579605 USO1O60763 962 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CACNB1Q02641 598 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SOX4Q06945 474 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TMEM196Q5HYL7 178 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 GPR158Q5T848 1215 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 Q6ZUG5 572 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 BRF1Q92994 677 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 LRIG1Q96JA1 1093 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PRIMPOLQ96LW4 560 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PGLYRP2Q96PD5 576 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 RNF26Q9BY78 433 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TPSD1Q9BZJ3 242 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SMG9Q9H0W8 520 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 FZD8Q9H461 694 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 FBRSL1Q9HCM7 1045 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 KCNMB3Q9NPA1 279 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 GKN1Q9NS71 199 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 YIPF1Q9Y548 306 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 NUB1Q9Y5A7 615 aa14.49□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PODXLO00592 558 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 U2AF2P26368 475 aaKnown RBP eCLIP14.48□□□□□ -0.093e-14■■■□□ 18
CDK5RAP3-213ENST00000579605 RDXP35241 583 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 DHPSP49366 369 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CCT2P78371 535 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SCAPQ12770 1279 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 MRPL58Q14197 206 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 KRT32Q14532 448 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PTPAQ15257 358 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 NTRK3Q16288 839 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TMC8Q8IU68 726 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 BPIFB1Q8TDL5 484 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PIGOQ8TEQ8 1089 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 HAS1Q92839 578 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 EIF2AK1Q9BQI3 630 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 LRRC3Q9BY71 257 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 NCOA5Q9HCD5 579 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SH3GLB2Q9NR46 395 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 THG1LQ9NWX6 298 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ITPR1Q14643 2758 aa14.48□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SMIM28A0A1B0GU29 152 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SYN3O14994 580 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CCNT1O60563 726 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PRAMEF12O95522 483 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 APBB3O95704 486 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CAPNS1P04632 268 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 EDN1P05305 212 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 EPHB3P54753 998 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PSMD2Q13200 908 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 DMC1Q14565 340 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 MAPK6Q16659 721 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 FAM187BQ17R55 369 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TSGA10IPQ3SY00 556 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TRIM68Q6AZZ1 485 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ZNF280DQ6N043 979 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 RPLP0P6Q8NHW5 317 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ANKEF1Q9NU02 776 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SLC27A5Q9Y2P5 690 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ADAMTS20P59510 1910 aa14.47□□□□□ -0.09
CDK5RAP3-213ENST00000579605 LOC400499M0QZD8 3231 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 M0R2N6 131 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 HMGB1P09429 215 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 OR4Q2P0C623 313 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 BCKDHBP21953 392 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 GABRR2P28476 465 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 GALK1P51570 392 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 OSTNP61366 133 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CYP4F8P98187 520 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 DUSP4Q13115 394 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 USP39Q53GS9 565 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ARHGAP15Q53QZ3 475 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TRIM61Q5EBN2 209 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 PMS2CLQ68D20 193 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 NAIF1Q69YI7 327 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 GAREM2Q75VX8 874 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 SKAP1Q86WV1 359 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 ADAM32Q8TC27 787 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CHFRQ96EP1 664 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 DNAJC25Q9H1X3 360 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 EBF3Q9H4W6 596 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 TPCN1Q9ULQ1 816 aa14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CIZ1Q9ULV3 898 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-213ENST00000579605 CCDC194A0A1B0GVG4 234 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 OTOL1A6NHN0 477 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ACKR2O00590 384 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TRDMT1O14717 391 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CDC45O75419 566 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms