RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 BORCS6Q96GS4 357 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 SENP8Q96LD8 212 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 TSG101Q99816 390 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 CLSTN3Q9BQT9 956 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 RXFP1Q9HBX9 757 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 THEGQ9P2T0 379 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 PCDHB8Q9UN66 801 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 FRMD4BQ9Y2L6 1034 aa23.42■■□□□ 1.34
CDC42EP4-203ENST00000578516 KLRC2P26717 231 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 TAF6P49848 677 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 KCNQ1P51787 676 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 STIM1Q13586 685 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 MYBPC2Q14324 1141 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 SURF1Q15526 300 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 TDRD10Q5VZ19 366 aaKnown RBP23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 TRIML1Q8N9V2 468 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 CACTINQ8WUQ7 758 aaKnown RBP23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 TMEM174Q8WUU8 243 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 HLA-CQ95604 372 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 PPP2R3CQ969Q6 453 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 DHTKD1Q96HY7 919 aaPredicted RBP23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 ITGA11Q9UKX5 1188 aa23.41■■□□□ 1.34
CDC42EP4-203ENST00000578516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 M0QZQ0 153 aa23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 CST3P01034 146 aaPredicted RBP23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 CLCN4P51793 760 aa23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 PAK1Q13153 545 aa23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 BMS1Q14692 1282 aaKnown RBP23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 DUOXA2Q1HG44 320 aa23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 C12orf76Q8N812 135 aaPredicted RBP23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 TMEM209Q96SK2 561 aa23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 EMILIN2Q9BXX0 1053 aa23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 MTRRQ9UBK8 725 aa23.4■■□□□ 1.34
CDC42EP4-203ENST00000578516 HCRTO43612 131 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 TRAPPC3O43617 180 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 MBD3O95983 291 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 OR4Q2P0C623 313 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 RPL13P26373 211 aaKnown RBP23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 PSMC2P35998 433 aaKnown RBP23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 VAMP7P51809 220 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 LRRC63Q05C16 580 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 PPP3CAQ08209 521 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 ZNF560Q96MR9 790 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 CDY1Q9Y6F8 540 aa23.39■■□□□ 1.33
CDC42EP4-203ENST00000578516 CYB561D2O14569 222 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 SYN3O14994 580 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 CETN3O15182 167 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 LRRN2O75325 713 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 VNN1O95497 513 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 OR1D2P34982 312 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 ARPP19P56211 112 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 MYL6P60660 151 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 BIRC3Q13489 604 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 SV2CQ496J9 727 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 WSCD1Q658N2 575 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 RBM43Q6ZSC3 357 aaKnown RBP23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 TMC2Q8TDI7 906 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 CDCA3Q99618 268 aaPredicted RBP23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 STK39Q9UEW8 545 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 FBXL5Q9UKA1 691 aa23.38■■□□□ 1.33
CDC42EP4-203ENST00000578516 KPNA7A9QM74 516 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 TGM5O43548 720 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 C4BPAP04003 597 aaKnown RBP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 ADH1AP07327 375 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 WEE2P0C1S8 567 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 EPB41P11171 864 aaKnown RBP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 GCLMP48507 274 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 NLRP12P59046 1061 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 CLDN10P78369 228 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 RBP5P82980 135 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 FKBP3Q00688 224 aaKnown RBP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 MRPL58Q14197 206 aaKnown RBP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 CCDC142Q17RM4 750 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 CTXN3Q4LDR2 81 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 CAVIN1Q6NZI2 390 aaKnown RBP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 SYCE2Q6PIF2 218 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 OSTM1Q86WC4 334 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 HPDLQ96IR7 371 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 MSLNLQ96KJ4 702 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 RTP3Q9BQQ7 232 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 GTPBP4Q9BZE4 634 aaKnown RBP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 MAN1C1Q9NR34 630 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 FNIP2Q9P278 1114 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 L1RE1Q9UN81 338 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 POLIQ9UNA4 740 aa23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.37■■□□□ 1.33
CDC42EP4-203ENST00000578516 DENND4AQ7Z401 1863 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 GRXCR2A6NFK2 248 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 MAPK13O15264 365 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 TBC1D4O60343 1298 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 GLUD1P00367 558 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 ODC1P11926 461 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 ROR1Q01973 937 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 DCAF17Q5H9S7 520 aaPredicted RBP23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 CCDC183Q5T5S1 534 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 ANKRD54Q6NXT1 300 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 ANKS3Q6ZW76 656 aa23.36■■□□□ 1.33
CDC42EP4-203ENST00000578516 LRRC52Q8N7C0 313 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms