RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	GTF2B	Q00403	316 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MTAP	Q13126	283 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	REST	Q13127	1097 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TRIM29	Q14134	588 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PPP2R5A	Q15172	486 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TEAD2	Q15562	447 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	UVSSA	Q2YD98	709 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PABPC1L	Q4VXU2	614 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SPATA1	Q5VX52	437 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HAUS3	Q68CZ6	603 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CENPP	Q6IPU0	288 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZPBP2	Q6X784	338 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ANKS3	Q6ZW76	656 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HAUS6	Q7Z4H7	955 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LIMS2	Q7Z4I7	341 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	C1orf210	Q8IVY1	113 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ATAD1	Q8NBU5	361 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ERMN	Q8TAM6	284 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NKD2	Q969F2	451 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	UROC1	Q96N76	676 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CLIC6	Q96NY7	704 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ACAP3	Q96P50	834 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MRPL4	Q9BYD3	311 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PIDD1	Q9HB75	910 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PRMT8	Q9NR22	394 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TMEM30A	Q9NV96	361 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ANKFY1	Q9P2R3	1169 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SIX4	Q9UIU6	781 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FBXL21	Q9UKT6	434 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TBX20	Q9UMR3	447 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PCDHB8	Q9UN66	801 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DNM3	Q9UQ16	869 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SLC27A5	Q9Y2P5	690 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SIT1	Q9Y3P8	196 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	YIPF1	Q9Y548	306 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SDK1	Q7Z5N4	2213 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FRY	Q5TBA9	3013 aa		4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GREB1	Q4ZG55	1949 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ANAPC1	Q9H1A4	1944 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MAP1B	P46821	2468 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LAMA1	P25391	3075 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FRMD3	A2A2Y4	597 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MTMR11	A4FU01	709 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FAM170B	A6NMN3	283 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329		K7ESF4	209 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LAD1	O00515	517 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MICAL2	O94851	1124 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CLTA	P09496	248 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PTPN2	P17706	415 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GPR15	P49685	360 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ACOT2	P49753	483 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ARPP19	P56211	112 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LILRA4	P59901	499 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZXDB	P98169	803 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CREM	Q03060	361 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ADCY1	Q08828	1119 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NCBP1	Q09161	790 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FCHO2	Q0JRZ9	810 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TWF1	Q12792	350 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ELAVL2	Q12926	359 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DUSP4	Q13115	394 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SRSF5	Q13243	272 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GPR17	Q13304	367 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DMP1	Q13316	513 aa	Predicted RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	BMS1	Q14692	1282 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RABEP1	Q15276	862 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SAFB	Q15424	915 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SF3A1	Q15459	793 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	E2F4	Q16254	413 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GAB4	Q2WGN9	574 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CTXN3	Q4LDR2	81 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RILPL1	Q5EBL4	403 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	C9orf57	Q5W0N0	161 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	KRT79	Q5XKE5	535 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	JADE1	Q6IE81	842 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DTHD1	Q6ZMT9	781 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329		Q6ZS52	159 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TPRG1	Q6ZUI0	275 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	OSTM1	Q86WC4	334 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GPBP1	Q86WP2	473 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HACE1	Q8IYU2	909 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RAD54L	Q92698	747 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	STAM	Q92783	540 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HPS3	Q969F9	1004 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ELSPBP1	Q96BH3	223 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CHAMP1	Q96JM3	812 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZFYVE19	Q96K21	471 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	IFT74	Q96LB3	600 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DRC1	Q96MC2	740 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PGLYRP2	Q96PD5	576 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SLC22A12	Q96S37	553 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LPIN3	Q9BQK8	851 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CORO1B	Q9BR76	489 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ADPGK	Q9BRR6	497 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CCDC94	Q9BW85	323 aa	Predicted RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	OSBPL6	Q9BZF3	934 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms