RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ITIH3Q06033 890 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 CYP24A1Q07973 514 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 LILRA6Q6PI73 481 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 SLC9A9Q8IVB4 645 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 C12orf76Q8N812 135 aaPredicted RBP23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 SPATA20Q8TB22 786 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 TMEM174Q8WUU8 243 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 SUSD6Q92537 303 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 ERCC4Q92889 916 aaPredicted RBP23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 POP1Q99575 1024 aaKnown RBP23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 DMAC2Q9NW81 257 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 MAPK8IP1Q9UQF2 711 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 PCDHA5Q9Y5H7 936 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 CDY1Q9Y6F8 540 aa23.97■■□□□ 1.43
SMARCD2-206ENST00000577990 MTCL1Q9Y4B5 1905 aaKnown RBP23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 CALUO43852 315 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 TMEM191BP0C7N4 346 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 TAF6P49848 677 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 MRPL58Q14197 206 aaKnown RBP23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 PSMD6Q15008 389 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 LMBRD2Q68DH5 695 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 CES5AQ6NT32 575 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 RSPO2Q6UXX9 243 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 C1orf127Q8N9H9 656 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 HDAC7Q8WUI4 952 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 ANKRD36BP1Q96IX9 119 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 FAM84AQ96KN4 292 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 ZNF560Q96MR9 790 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 MTMR12Q9C0I1 747 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 ADAM7Q9H2U9 754 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 PLEKHA4Q9H4M7 779 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 INTS13Q9NVM9 706 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 ITGA11Q9UKX5 1188 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 TRAF3IP3Q9Y228 551 aa23.96■■□□□ 1.43
SMARCD2-206ENST00000577990 PTPRJQ12913 1337 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 SPTLC1O15269 473 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 DCXO43602 365 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 GPR37L1O60883 481 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 PRPF40AO75400 957 aaKnown RBP23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 NR3C1P04150 777 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 ITGB3P05106 788 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 SPATA31D3P0C874 917 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 POLR2BP30876 1174 aaKnown RBP23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 OR1D2P34982 312 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 RAB33AQ14088 237 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 MYBPC2Q14324 1141 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 ZNF280DQ6N043 979 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 SPATA31D4Q6ZUB0 917 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 WDR49Q8IV35 697 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 SMYD4Q8IYR2 804 aaPredicted RBP23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 KREMEN2Q8NCW0 462 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 SENP8Q96LD8 212 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 FNBP1Q96RU3 617 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 FBXW11Q9UKB1 542 aa23.95■■□□□ 1.42
SMARCD2-206ENST00000577990 ARHGEF37A1IGU5 675 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 TBC1D4O60343 1298 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 DLATP10515 647 aaKnown RBP23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 ODC1P11926 461 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 ALADP13716 330 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 TYMPP19971 482 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 PNPLA4P41247 253 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 CTXN3Q4LDR2 81 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 ZNF658Q5TYW1 1059 aaPredicted RBP23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 SLC8B1Q6J4K2 584 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 TMC5Q6UXY8 1006 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 CLEC17AQ6ZS10 378 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 CMASQ8NFW8 434 aaPredicted RBP23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 OR5B17Q8NGF7 314 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 CCDC127Q96BQ5 260 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 MFSD14AQ96MC6 490 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 CGRRF1Q99675 332 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 MUTYHQ9UIF7 546 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 CDH22Q9UJ99 828 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 AGAP1Q9UPQ3 857 aa23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 TIMM13Q9Y5L4 95 aaPredicted RBP23.94■■□□□ 1.42
SMARCD2-206ENST00000577990 TNNC2P02585 160 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 YWHAHQ04917 246 aaPredicted RBP23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 CBX2Q14781 532 aaPredicted RBP23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 NFIL3Q16649 462 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 DUOXA2Q1HG44 320 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 SV2CQ496J9 727 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 USP37Q86T82 979 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 RNF135Q8IUD6 432 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 CSGALNACT2Q8N6G5 542 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 CXorf38Q8TB03 319 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 RIPOR3Q96MK2 946 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 GTPBP4Q9BZE4 634 aaKnown RBP23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 SIX4Q9UIU6 781 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 FBXL5Q9UKA1 691 aa23.93■■□□□ 1.42
SMARCD2-206ENST00000577990 TSC2P49815 1807 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 OAZ2O95190 189 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 KRT19P08727 400 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 TNNI1P19237 187 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 MTHFRP42898 656 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 RBP5P82980 135 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 ROR1Q01973 937 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 COBLL1Q53SF7 1204 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 GPR149Q86SP6 731 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 LRRC52Q8N7C0 313 aa23.92■■□□□ 1.42
SMARCD2-206ENST00000577990 NECTIN4Q96NY8 510 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms