RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 ZNF528Q3MIS6 628 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 SWSAP1Q6NVH7 229 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 PADI6Q6TGC4 694 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 GET4Q7L5D6 327 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-217ENST00000577897 CCAR2Q8N163 923 aaKnown RBP15.2■□□□□ 0.02
SREBF1-217ENST00000577897 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 LPPQ93052 612 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 NXPE3Q969Y0 559 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 BORCS6Q96GS4 357 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 VN1R3Q9BXE9 311 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 TMEM206Q9H813 350 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 TBC1D7Q9P0N9 293 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 DNAJB4Q9UDY4 337 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 FBXO4Q9UKT5 387 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 TRAF3IP3Q9Y228 551 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 PCDHGA2Q9Y5H1 932 aa15.2■□□□□ 0.02
SREBF1-217ENST00000577897 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 COL4A3Q01955 1670 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 NPHP3-ACAD11A0A0J9YXS1 232 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 SLC16A3O15427 465 aaKnown RBP15.19■□□□□ 0.02
SREBF1-217ENST00000577897 MFAP3LO75121 409 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 EPB41P11171 864 aaKnown RBP15.19■□□□□ 0.02
SREBF1-217ENST00000577897 YWHABP31946 246 aaKnown RBP15.19■□□□□ 0.02
SREBF1-217ENST00000577897 SLC11A1P49279 550 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 ZNF131P52739 623 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 SMTNP53814 917 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 UBXN2BQ14CS0 331 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 NFIL3Q16649 462 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 FIGNQ5HY92 759 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 ABHD15Q6UXT9 468 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 CYP26C1Q6V0L0 522 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 LRRC71Q8N4P6 559 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 TC2NQ8N9U0 490 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 OR8K1Q8NGG5 319 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 SCFD1Q8WVM8 642 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 SMG7Q92540 1137 aaKnown RBP15.19■□□□□ 0.02
SREBF1-217ENST00000577897 HPS3Q969F9 1004 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 SHDQ96IW2 340 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 ERGIC2Q96RQ1 377 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 RUSC1Q9BVN2 902 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 EDEM3Q9BZQ6 932 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 NUCKS1Q9H1E3 243 aaKnown RBP15.19■□□□□ 0.02
SREBF1-217ENST00000577897 NDST4Q9H3R1 872 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 C17orf75Q9HAS0 396 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 PIDD1Q9HB75 910 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 TBC1D13Q9NVG8 400 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 GMEB2Q9UKD1 530 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
SREBF1-217ENST00000577897 PATJQ8NI35 1801 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 A0A1W2PQJ5 194 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 RFPL2O75678 378 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
SREBF1-217ENST00000577897 HOXB3P14651 431 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-217ENST00000577897 ATP4AP20648 1035 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 MARSP56192 900 aaKnown RBP15.18■□□□□ 0.02
SREBF1-217ENST00000577897 STARD6P59095 220 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 ARID5BQ14865 1188 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 ZCWPW2Q504Y3 356 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 EFCAB12Q6NXP0 572 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 EPM2AIP1Q7L775 607 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-217ENST00000577897 NELFCDQ8IXH7 590 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 EXOC8Q8IYI6 725 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 TXLNBQ8N3L3 684 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 CMASQ8NFW8 434 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-217ENST00000577897 CPLX3Q8WVH0 158 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 BBXQ8WY36 941 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-217ENST00000577897 EPC1Q9H2F5 836 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 ADAMTS10Q9H324 1103 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 PARD6AQ9NPB6 346 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 SLC2A4RGQ9NR83 387 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 MRPL17Q9NRX2 175 aaKnown RBP15.18■□□□□ 0.02
SREBF1-217ENST00000577897 EXOC7Q9UPT5 735 aa15.18■□□□□ 0.02
SREBF1-217ENST00000577897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■■■□□ 17.9
SREBF1-217ENST00000577897 KANSL1LA0AUZ9 987 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 CARNS1A5YM72 827 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 CSDE1O75534 798 aaKnown RBP15.17■□□□□ 0.02
SREBF1-217ENST00000577897 CCDC175P0C221 793 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 LAMP2P13473 410 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 TNNT1P13805 278 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 NR2F2P24468 414 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 TMOD1P28289 359 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 CASP14P31944 242 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 KRT9P35527 623 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 RARRES1P49788 294 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
SREBF1-217ENST00000577897 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-217ENST00000577897 HTR4Q13639 388 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 XKR9Q5GH70 373 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 NOMO2Q5JPE7 1267 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 ELMSAN1Q6PJG2 1045 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 TSSK4Q6SA08 328 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 GLB1LQ6UWU2 654 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 ZC3H3Q8IXZ2 948 aaKnown RBP15.17■□□□□ 0.02
SREBF1-217ENST00000577897 SYCP3Q8IZU3 236 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 KIFAP3Q92845 792 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 HVCN1Q96D96 273 aa15.17■□□□□ 0.02
SREBF1-217ENST00000577897 KCTD10Q9H3F6 313 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms