RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 ADA2Q9NZK5 511 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 M0QYV0 167 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 FKBP6O75344 327 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SRGAP2CP0DJJ0 459 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 FECHP22830 423 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 CASP4P49662 377 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 COL9A3Q14050 684 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 ADRM1Q16186 407 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 C16orf87Q6PH81 154 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SP8Q8IXZ3 490 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 INPP4AQ96PE3 977 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 RAB6BQ9NRW1 208 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 ATRNO75882 1429 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 AP3B1O00203 1094 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 CACNB3P54284 484 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 OSTNP61366 133 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 STILQ15468 1287 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 TRMT5Q32P41 509 aaKnown RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 NCAPG2Q86XI2 1143 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 MASTLQ96GX5 879 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 EIF2AQ9BY44 585 aaKnown RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SAR1AQ9NR31 198 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 ANKEF1Q9NU02 776 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 AKT3Q9Y243 479 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 FIS1Q9Y3D6 152 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 DDX3XO00571 662 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 STXBP2Q15833 593 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SLC27A3Q5K4L6 730 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 ITPRIPL1Q6GPH6 555 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 EXD1Q8NHP7 514 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 BAP1Q92560 729 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 RUSC1Q9BVN2 902 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 FAM53CQ9NYF3 392 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 CHMP2BQ9UQN3 213 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 NAALADL1Q9UQQ1 740 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 ACTL7BQ9Y614 415 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 CDY2AQ9Y6F7 541 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 CDY1Q9Y6F8 540 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 A8MXQ7 604 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 MSH4O15457 936 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 S100BP04271 92 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SERPINB3P29508 390 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SREBF1P36956 1147 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 RPL21P46778 160 aaKnown RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 KCTD2Q14681 263 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 ZNF568Q3ZCX4 644 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 IRGCQ6NXR0 463 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 PRPF39Q86UA1 669 aaKnown RBP10.89□□□□□ -0.67
PTPRM-205ENST00000577827 SLC35C1Q96A29 364 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 PBXIP1Q96AQ6 731 aa10.89□□□□□ -0.67
PTPRM-205ENST00000577827 FAM196BA6NMK8 535 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 HLA-DRAP01903 254 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 RBP3P10745 1247 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ALDH5A1P51649 535 aaPredicted RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 KCNQ4P56696 695 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 Q4G0T1 1027 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 NAIF1Q69YI7 327 aaPredicted RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 SWSAP1Q6NVH7 229 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 LRRC55Q6ZSA7 311 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 LRRC6Q86X45 466 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 DDI1Q8WTU0 396 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 MCEEQ96PE7 176 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 MRPL46Q9H2W6 279 aaKnown RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 TRPC5Q9UL62 973 aaPredicted RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 STAP1Q9ULZ2 295 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 RPL26L1Q9UNX3 145 aaKnown RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 MEGF6O75095 1541 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 UBTFL6P0CB48 400 aaPredicted RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 GNAT1P11488 350 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 CYP11B1P15538 503 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 COPAP53621 1224 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 NLRP11P59045 1033 aaKnown RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ACTR2P61160 394 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 TRADDQ15628 312 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 SGSM1Q2NKQ1 1148 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ARID3BQ8IVW6 561 aaPredicted RBP10.88□□□□□ -0.67
PTPRM-205ENST00000577827 JADE3Q92613 823 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ZBTB10Q96DT7 871 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ING2Q9H160 280 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 ZNF302Q9NR11 478 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 SHOC2Q9UQ13 582 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 L3MBTL1Q9Y468 752 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 GSTA4O15217 222 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 KCNN4O15554 427 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 CST8O60676 142 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 PROSCO94903 275 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 APRTP07741 180 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 DRD4P21917 467 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 NCOA4Q13772 614 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 KIF19Q2TAC6 998 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 XKR3Q5GH77 459 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 VGLL2Q8N8G2 317 aa10.88□□□□□ -0.67
PTPRM-205ENST00000577827 RDM1Q8NG50 284 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms