RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 OR5B17Q8NGF7 314 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 ZNF516Q92618 1163 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 SEMA4DQ92854 862 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 MSLNLQ96KJ4 702 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 FNBP1Q96RU3 617 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 CGRRF1Q99675 332 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 APOL6Q9BWW8 343 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 PHF7Q9BWX1 381 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 TTYH3Q9C0H2 523 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 SIX2Q9NPC8 291 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 CPSF3Q9UKF6 684 aaKnown RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 CITO14578 2027 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 LACTBL1A8MY62 500 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 RPS6KA5O75582 802 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 PARNO95453 639 aaKnown RBP10.86□□□□□ -0.67
CRLF3-202ENST00000577725 TPM1P09493 284 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 TNNI1P19237 187 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 KRT9P35527 623 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 NDUFV1P49821 464 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 POLR2FP61218 127 aaKnown RBP10.86□□□□□ -0.67
CRLF3-202ENST00000577725 HTRA4P83105 476 aaPredicted RBP10.86□□□□□ -0.67
CRLF3-202ENST00000577725 TRIM14Q14142 442 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 IKBKEQ14164 716 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 GPNMBQ14956 572 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 UBXN11Q5T124 520 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 E4F1Q66K89 784 aaPredicted RBP10.86□□□□□ -0.67
CRLF3-202ENST00000577725 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
CRLF3-202ENST00000577725 ARHGEF19Q8IW93 802 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 EFCAB13Q8IY85 973 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 SMRP1Q8NCR6 262 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 HINFPQ9BQA5 517 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 CXCL16Q9H2A7 254 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 AGO3Q9H9G7 860 aaKnown RBP10.86□□□□□ -0.67
CRLF3-202ENST00000577725 RPF1Q9H9Y2 349 aaKnown RBP10.86□□□□□ -0.67
CRLF3-202ENST00000577725 TMEM8AQ9HCN3 771 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 RNF19AQ9NV58 838 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 CAPN11Q9UMQ6 739 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 ST3GAL5Q9UNP4 418 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 HES2Q9Y543 173 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 FHOD1Q9Y613 1164 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
CRLF3-202ENST00000577725 USP24Q9UPU5 2620 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 LINC01565O15544 149 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 N4BP1O75113 896 aaKnown RBP10.85□□□□□ -0.67
CRLF3-202ENST00000577725 CXCL10P02778 98 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 NFICP08651 508 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 CLTAP09496 248 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 PNMA6AP0CW24 399 aaPredicted RBP10.85□□□□□ -0.67
CRLF3-202ENST00000577725 SDHBP21912 280 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 CD52P31358 61 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 GUCY2FP51841 1108 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 NFX1Q12986 1120 aaKnown RBP10.85□□□□□ -0.67
CRLF3-202ENST00000577725 ADAM15Q13444 863 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 BIRC3Q13489 604 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 LPIN1Q14693 890 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 DCAF4L1Q3SXM0 396 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 FBXO47Q5MNV8 452 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 TDRD10Q5VZ19 366 aaKnown RBP10.85□□□□□ -0.67
CRLF3-202ENST00000577725 IQCEQ6IPM2 695 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 NOTUMQ6P988 496 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 PDXDC1Q6P996 788 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 SLC27A1Q6PCB7 646 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 TRIM65Q6PJ69 517 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 SV2AQ7L0J3 742 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 RRAGAQ7L523 313 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 TMEM139Q8IV31 216 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 EHBP1Q8NDI1 1231 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 LMO3Q8TAP4 145 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 TAS1R2Q8TE23 839 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 BAP1Q92560 729 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 ADPGKQ9BRR6 497 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 PI4K2AQ9BTU6 479 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 NUP58Q9BVL2 599 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 ZMYND15Q9H091 742 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 LMAN2LQ9H0V9 348 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 NXF3Q9H4D5 531 aaKnown RBP10.85□□□□□ -0.67
CRLF3-202ENST00000577725 IGFLR1Q9H665 355 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 ERVK-5Q9HDB9 667 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 SNTG2Q9NY99 539 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 LUC7L2Q9Y383 392 aaKnown RBP10.85□□□□□ -0.67
CRLF3-202ENST00000577725 RALGAPA2Q2PPJ7 1873 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 TANC1Q9C0D5 1861 aa10.85□□□□□ -0.67
CRLF3-202ENST00000577725 A0A1W2PQJ5 194 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 GTPBP10A4D1E9 387 aaKnown RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 LRRC53A6NM62 1247 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 STX10O60499 249 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 VNN1O95497 513 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 HLA-DRAP01903 254 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 C4BPAP04003 597 aaKnown RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 CKBP12277 381 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 SKILP12757 684 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 SELPP16109 830 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 AXLP30530 894 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms