RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 ACKR2O00590 384 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 PODXLO00592 558 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 SYN3O14994 580 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 LIG1P18858 919 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 MAPK6Q16659 721 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 BMP2KLQ5H9B9 411 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 SH3PXD2AQ5TCZ1 1133 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 ALKAL1Q6UXT8 129 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 ZBTB8OSQ8IWT0 167 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 YAF2Q8IY57 180 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 SYNPOQ8N3V7 929 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 LEMD2Q8NC56 503 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 ADPGKQ9BRR6 497 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
SNRPN-208ENST00000577565 SCNM1Q9BWG6 230 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
SNRPN-208ENST00000577565 SLITRK6Q9H5Y7 841 aa12.79□□□□□ -0.36
SNRPN-208ENST00000577565 NUP210Q8TEM1 1887 aaPredicted RBP12.78□□□□□ -0.36
SNRPN-208ENST00000577565 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 DCLK1O15075 740 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 AKAP3O75969 853 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 HSPA4P34932 840 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 DCAF4L1Q3SXM0 396 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 FSTL4Q6MZW2 842 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 GAREM2Q75VX8 874 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 SLFN12Q8IYM2 578 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 FAM177A1Q8N128 213 aaPredicted RBP12.78□□□□□ -0.36
SNRPN-208ENST00000577565 ELMOD1Q8N336 334 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 ZCCHC14Q8WYQ9 949 aaKnown RBP12.78□□□□□ -0.36
SNRPN-208ENST00000577565 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
SNRPN-208ENST00000577565 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.36
SNRPN-208ENST00000577565 OTOL1A6NHN0 477 aaPredicted RBP12.77□□□□□ -0.37
SNRPN-208ENST00000577565 H7C4K7 107 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 TAF4O00268 1085 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 CDX4O14627 284 aaPredicted RBP12.77□□□□□ -0.37
SNRPN-208ENST00000577565 MARCH6O60337 910 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 OR4Q2P0C623 313 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 ATF7IP2Q5U623 682 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 C18orf25Q96B23 403 aaPredicted RBP12.77□□□□□ -0.37
SNRPN-208ENST00000577565 SUSD3Q96L08 255 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 HHIPQ96QV1 700 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 GPR88Q9GZN0 384 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 CDT1Q9H211 546 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 POLD4Q9HCU8 107 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 DMXL2Q8TDJ6 3036 aa12.77□□□□□ -0.37
SNRPN-208ENST00000577565 DSPP15924 2871 aaKnown RBP12.76□□□□□ -0.37
SNRPN-208ENST00000577565 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
SNRPN-208ENST00000577565 MED24O75448 989 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 CAVIN2O95810 425 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 ATP2B1P20020 1258 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 GRM5P41594 1212 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 NAMPTP43490 491 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 NR5A1Q13285 461 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 ARHGAP29Q52LW3 1261 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 TMEM196Q5HYL7 178 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 NAIF1Q69YI7 327 aaPredicted RBP12.76□□□□□ -0.37
SNRPN-208ENST00000577565 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 KIAA1211LQ6NV74 962 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 TTC9BQ8N6N2 239 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 FAM200AQ8TCP9 573 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 DDX12PQ92771 950 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 CCDC43Q96MW1 224 aaKnown RBP12.76□□□□□ -0.37
SNRPN-208ENST00000577565 PGLYRP2Q96PD5 576 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 TMEM209Q96SK2 561 aa12.76□□□□□ -0.37
SNRPN-208ENST00000577565 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
SNRPN-208ENST00000577565 FBRSL1Q9HCM7 1045 aaKnown RBP12.76□□□□□ -0.37
SNRPN-208ENST00000577565 PATE3B3GLJ2 98 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 BAG4O95429 457 aaKnown RBP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 EGFP01133 1207 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 XRCC6P12956 609 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 CPB1P15086 417 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 CSRP1P21291 193 aaKnown RBP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 OSTNP61366 133 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 CREB5Q02930 508 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 STK3Q13188 491 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 SETXQ7Z333 2677 aaKnown RBP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 CATSPER3Q86XQ3 398 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 DEPTORQ8TB45 409 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 EZH1Q92800 747 aaPredicted RBP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 COL26A1Q96A83 441 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 TBC1D32Q96NH3 1257 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 NAP1L4Q99733 375 aaKnown RBP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 POLR3CQ9BUI4 534 aaPredicted RBP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 SMG9Q9H0W8 520 aaKnown RBP12.75□□□□□ -0.37
SNRPN-208ENST00000577565 PTPRHQ9HD43 1115 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 HPS4Q9NQG7 708 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 OBP2AQ9NY56 170 aa12.75□□□□□ -0.37
SNRPN-208ENST00000577565 MAFFQ9ULX9 164 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms