RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 LONP2Q86WA8 852 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 FAM200AQ8TCP9 573 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 DDX1Q92499 740 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 DDX12PQ92771 950 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 C18orf25Q96B23 403 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 TARS2Q9BW92 718 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 RAB34Q9BZG1 259 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 C8orf33Q9H7E9 229 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 ARHGAP28Q9P2N2 729 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-212ENST00000576613 RALGAPA1Q6GYQ0 2036 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 SLC38A8A6NNN8 435 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 CHURC1-FNTBB4DL54 471 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 ARNTLO00327 626 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 PAPSS2O95340 614 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 HARSP12081 509 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 FNTBP49356 437 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 EPHB3P54753 998 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 FCHO2Q0JRZ9 810 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 STRN3Q13033 797 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 ECM1Q16610 540 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 DGKKQ5KSL6 1271 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 RNF19BQ6ZMZ0 732 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 BEST2Q8NFU1 509 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 SHKBP1Q8TBC3 707 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 C8orf76Q96K31 380 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 C17orf75Q9HAS0 396 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 KCNG1Q9UIX4 513 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 DNM3Q9UQ16 869 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 YIPF1Q9Y548 306 aa12.71□□□□□ -0.37
CTDNEP1-212ENST00000576613 NUP210Q8TEM1 1887 aaPredicted RBP12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 A0A1W2PRU2 124 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 HIP1RO75146 1068 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 TOM1L1O75674 476 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 ALDH1A3P47895 512 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 GAS6Q14393 721 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 PDIA5Q14554 519 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 NOLC1Q14978 699 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 CEP68Q76N32 757 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 TAS1R3Q7RTX0 852 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 USP37Q86T82 979 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 RALGPS2Q86X27 583 aaPredicted RBP12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 DAW1Q8N136 415 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 CHAMP1Q96JM3 812 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 NOL7Q9UMY1 257 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 MAP1BP46821 2468 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-212ENST00000576613 NCANO14594 1321 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 OR6C75A6NL08 312 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 SPECC1L-ADORA2AF8WAN1 911 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 M0QZQ0 153 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 DPYSL4O14531 572 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 ABLIM1O14639 778 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 HRO43593 1189 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 OAZ2O95190 189 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 FGF19O95750 216 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 CTHP32929 405 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 NEK4P51957 841 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 DMWDQ09019 674 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 SLC10A6Q3KNW5 377 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 ARHGAP29Q52LW3 1261 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 HEATR6Q6AI08 1181 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 SYNPOQ8N3V7 929 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 PGLYRP2Q96PD5 576 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 RBM12Q9NTZ6 932 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 TUBGCP4Q9UGJ1 667 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 ASB3Q9Y575 518 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 ZFHX4Q86UP3 3567 aa12.69□□□□□ -0.38
CTDNEP1-212ENST00000576613 E9PMD0 336 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 K7ESF4 209 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 SLC16A4O15374 487 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 CLDN3O15551 220 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 MEFVO15553 781 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 XPOTO43592 962 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 KCNA4P22459 653 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 HOXA6P31267 233 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 MATR3P43243 847 aaKnown RBP eCLIP12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 SOX9P48436 509 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 SMTNP53814 917 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 DUSP4Q13115 394 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 GPR17Q13304 367 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 AASDHQ4L235 1098 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 ARHGAP15Q53QZ3 475 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 ZPBP2Q6X784 338 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 Q6ZS52 159 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 TMC8Q8IU68 726 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 FAM160A2Q8N612 972 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms