RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SMAD1Q15797 465 aaKnown RBP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 PPIL6Q8IXY8 311 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 OPTNQ96CV9 577 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 NMD3Q96D46 503 aaKnown RBP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 BTBD10Q9BSF8 475 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 TBC1D23Q9NUY8 699 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 DTNAQ9Y4J8 743 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZNF335Q9H4Z2 1342 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 TRIM49D1C9J1S8 452 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 SMAPO00193 183 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 RARAP10276 462 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 PYGMP11217 842 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 TBCCQ15814 346 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 THNSL1Q8IYQ7 743 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 NDUFAF2Q8N183 169 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 ARHGEF26Q96DR7 871 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 GTSE1Q9NYZ3 720 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 ENO3P13929 434 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 PEX5P50542 639 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 COPAP53621 1224 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 RIPK1Q13546 671 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 RASA2Q15283 850 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 IL17AQ16552 155 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 TRMT5Q32P41 509 aaKnown RBP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 CCT7Q99832 543 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 TMEM120AQ9BXJ8 343 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 AIM2O14862 343 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 CCND2P30279 289 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 PSMC5P62195 406 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 KRT76Q01546 638 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 ROR2Q01974 943 aaKnown RBP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 EFTUD2Q15029 972 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 KCTD17Q8N5Z5 321 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 ORC6Q9Y5N6 252 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 LMTK3Q96Q04 1460 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 KIAA0391O15091 583 aaKnown RBP13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 CST8O60676 142 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 NCALDP61601 193 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 ITKQ08881 620 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 ACBD5Q5T8D3 534 aaPredicted RBP13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 HEATR6Q6AI08 1181 aaKnown RBP13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 MCEEQ96PE7 176 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 TMEM8AQ9HCN3 771 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 SLC24A2Q9UI40 661 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 NUB1Q9Y5A7 615 aa13.77□□□□□ -0.2
PCDHGB3-201ENST00000576222 KRT16P08779 473 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 RBP3P10745 1247 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 SERPINB9P50453 376 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 PRAMEP78395 509 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 PIGHQ14442 188 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 KIF19Q2TAC6 998 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 TTC39BQ5VTQ0 682 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 NINJ2Q9NZG7 142 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 FKBP6O75344 327 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 RNF169Q8NCN4 708 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 SHCBP1LQ9BZQ2 653 aa13.77□□□□□ -0.21
PCDHGB3-201ENST00000576222 F5H423 210 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 WNT7AO00755 349 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 KCNN4O15554 427 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 FECHP22830 423 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 MMP13P45452 471 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 CCNG2Q16589 344 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 SLC5A5Q92911 643 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 SLC35C1Q96A29 364 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 PURBQ96QR8 312 aaKnown RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 SRGAP2CP0DJJ0 459 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 PRKCIP41743 596 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 GABPAQ06546 454 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 CDKL3Q8IVW4 592 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 PPP2R3CQ969Q6 453 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 RPF1Q9H9Y2 349 aaKnown RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 KLHL8Q9P2G9 620 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 DIP2CQ9Y2E4 1556 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 RASSF9O75901 435 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 SDC4P31431 198 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 FLT3P36888 993 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 PTDSS1P48651 473 aaKnown RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 DRG2P55039 364 aaKnown RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 FAM102AQ5T9C2 384 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 RNF43Q68DV7 783 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 DUPD1Q68J44 220 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 TBC1D10AQ9BXI6 508 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 FAM192AQ9GZU8 254 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 GRIN2DO15399 1336 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 PSTPIP1O43586 416 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms