RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 TNIP3Q96KP6 325 aa8.9□□□□□ -0.99
NCBP3-205ENST00000575815 FAM204AQ9H8W3 233 aa8.9□□□□□ -0.99
NCBP3-205ENST00000575815 MAGED2Q9UNF1 606 aaPredicted RBP8.9□□□□□ -0.99
NCBP3-205ENST00000575815 SCINQ9Y6U3 715 aa8.9□□□□□ -0.99
NCBP3-205ENST00000575815 FRMD3A2A2Y4 597 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 GTPBP10A4D1E9 387 aaKnown RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 UNCXA6NJT0 531 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 I3L4J1 428 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 BUB1BO60566 1050 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 INHAP05111 366 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 ELF1P32519 619 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 NME3Q13232 169 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 EPM2AIP1Q7L775 607 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 ZNF410Q86VK4 478 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 ACSF2Q96CM8 615 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 MCEEQ96PE7 176 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 PRDM10Q9NQV6 1147 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 DNAJC17Q9NVM6 304 aaKnown RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 TNFSF13BQ9Y275 285 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 PCDHA2Q9Y5H9 948 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 MYH8P13535 1937 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 LPXNO60711 386 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CST3P01034 146 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CALB1P05937 261 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 RRM1P23921 792 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 HOXD13P35453 343 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 MLH1P40692 756 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 APLP1P51693 650 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 RTP1P59025 263 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 TAPT1Q6NXT6 567 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 SLC9A9Q8IVB4 645 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CCNYQ8ND76 341 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 FAM118BQ9BPY3 351 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 GOLGA2P5Q9HBQ8 144 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CREBZFQ9NS37 354 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 TRMT13Q9NUP7 481 aaKnown RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 ALG6Q9Y672 507 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 TLL2Q9Y6L7 1015 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 COL11A2P13942 1736 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 TIAM2Q8IVF5 1701 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 DDX3XO00571 662 aaKnown RBP eCLIP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CYB561D2O14569 222 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CCND3P30281 292 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 SDC4P31431 198 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 TUBB4BP68371 445 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CDR2Q01850 454 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 UAP1Q16222 522 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-205ENST00000575815 CCDC62Q6P9F0 684 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 PPP1R21Q6ZMI0 780 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 MAP7D3Q8IWC1 876 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 RNF139Q8WU17 664 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 ZNF606Q8WXB4 792 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 PARD6BQ9BYG5 372 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 RNF186Q9NXI6 227 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 SLC45A1Q9Y2W3 748 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 TRPV2Q9Y5S1 764 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 IKBKGQ9Y6K9 419 aa8.89□□□□□ -0.99
NCBP3-205ENST00000575815 SGK1O00141 431 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 GJB6O95452 261 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 C22orf31O95567 290 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 PDGFRAP16234 1089 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 GBP2P32456 591 aaPredicted RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 SCNN1GP51170 649 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 PLTPP55058 493 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 SNX17Q15036 470 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 FBXO47Q5MNV8 452 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 COG1Q8WTW3 980 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 SYN2Q92777 582 aaPredicted RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 RPGRIP1Q96KN7 1286 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 SIK2Q9H0K1 926 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 SRRDQ9UH36 339 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 PCDHB7Q9Y5E2 793 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 HEY1Q9Y5J3 304 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 ERICH4A6NGS2 130 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 COMTP21964 271 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 NDST1P52848 882 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 SMTNL2Q2TAL5 461 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 ZACNQ401N2 412 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 CASC4Q6P4E1 433 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 NOP9Q86U38 636 aaKnown RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 TRIB2Q92519 343 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 BAP1Q92560 729 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 SLC38A7Q9NVC3 462 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 TAS2R14Q9NYV8 317 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 AIPL1Q9NZN9 384 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 PPME1Q9Y570 386 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 TTLL13PA6NNM8 815 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 MOCS2O96007 188 aaPredicted RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 DARSP14868 501 aaKnown RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 GRIK1P39086 918 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 BFSP2Q13515 415 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 TRIM72Q6ZMU5 477 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 NYAP1Q6ZVC0 841 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 EMC1Q8N766 993 aa8.88□□□□□ -0.99
NCBP3-205ENST00000575815 C18orf25Q96B23 403 aaPredicted RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 NTPCRQ9BSD7 190 aaKnown RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 EIF2AQ9BY44 585 aaKnown RBP8.88□□□□□ -0.99
NCBP3-205ENST00000575815 TRPV6Q9H1D0 765 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms